Virgibacillus necropolis: CFK40_11465
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Entry
CFK40_11465 CDS
T04976
Name
(GenBank) endonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
vne
Virgibacillus necropolis
Pathway
vne03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
vne00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CFK40_11465
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vne03400
]
CFK40_11465
Enzymes [BR:
vne01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
CFK40_11465
DNA repair and recombination proteins [BR:
vne03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
CFK40_11465
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
DUF2865
Motif
Other DBs
NCBI-ProteinID:
ASN05583
UniProt:
A0A221MD46
LinkDB
All DBs
Position
complement(2380801..2381637)
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AA seq
278 aa
AA seq
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MKFGSHVSIREGYLGAAKQALSMKASAFQYFPKNPRSLSVKEFSKDDTALCKKFCEENAL
ESVSHTPYPTNLTSTDDHKKNLVIQSLLNDLEITEACGSIGAVVHFGKLIYRDDPLASYR
LMIETLNEVLCQWEGNCKILLENNAGKPGTIGTTMEELVQVRNLSEKPEKIGFCLDTCHA
FASGLWNGENWNEVMDKGIELGYFDQLNVIHFNNSKYDTGLGKDRHATIFGDGYITEAQF
HQLIKTSQLEDIPFILETPKDKITHREEIGLLMEKWGT
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgaaattcggtagtcatgtttccattagagaaggctatttaggcgctgcgaaacaagcg
ttatctatgaaagcttctgcctttcaatattttcccaagaaccctagaagtttatctgta
aaagaatttagtaaagacgatacagcgttatgcaagaaattctgtgaagaaaacgcccta
gaatcggtaagtcacaccccataccctacaaacttaacatctacagatgatcataaaaag
aatctggttatccaatcgttattaaatgatttagagattaccgaggcatgtggttcgatt
ggggcagttgtacacttcggtaagctgatttatcgtgatgatccactagcgagttatcgc
ttaatgattgaaacgctcaatgaagttctttgccaatgggaaggaaactgtaaaattctt
cttgaaaacaatgcaggaaaacctggaacaataggaaccacaatggaagagcttgtccag
gtccgtaatttgtctgagaaacctgaaaagataggtttctgtctcgacacatgccacgcc
tttgcgagcggactatggaatggtgaaaactggaatgaagtaatggacaaaggaatagaa
ctcggatactttgatcagttaaatgtcatccattttaataactcaaaatatgataccgga
ttaggaaaggatcgtcacgctactatttttggcgatgggtacataacagaagctcaattt
caccagctaattaaaacgtcacaattagaagatatcccctttattttagaaacaccaaaa
gataagattacacatagggaagagatagggctgttaatggaaaagtggggtacatag
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