Virgibacillus necropolis: CFK40_11540
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Entry
CFK40_11540 CDS
T04976
Name
(GenBank) hydroxymethylglutaryl-CoA lyase
KO
K01640
hydroxymethylglutaryl-CoA lyase [EC:
4.1.3.4
]
Organism
vne
Virgibacillus necropolis
Pathway
vne00280
Valine, leucine and isoleucine degradation
vne00650
Butanoate metabolism
vne00907
Pinene, camphor and geraniol degradation
vne01100
Metabolic pathways
vne01120
Microbial metabolism in diverse environments
vne04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
vne00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
CFK40_11540
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
CFK40_11540
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
CFK40_11540
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
CFK40_11540
Enzymes [BR:
vne01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.4 hydroxymethylglutaryl-CoA lyase
CFK40_11540
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Gene cluster
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Motif
Pfam:
HMGL-like
DUF3164
Motif
Other DBs
NCBI-ProteinID:
ASN05598
UniProt:
A0A221MD32
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Position
complement(2397998..2398897)
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AA seq
299 aa
AA seq
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MNFPKNVSIKEVGPRDGLQNESEMVPTDAKIEWINMLSDSGTSYIEISSFVHPDWIPQLK
DATEVAKKIKRNPNVTYAALVPNNTGLERALEVNIDEVCLFLSASQTHNKKNINKTIEET
YPILESVSTESKRANKAIRGYVSTVFGCPYEGEIDTNKVIMICDNLYTMGVDEISIGDTI
GVANPAQVARVLEQLLRYFPKEKLAMHFHNTRGTALANVLVAMNYGITKFDSAVGGLGGC
PYAKGASGNLATDDLLYMLHRMGIITGIDENNIIDAALYIENYVKNLSSHQMKILKSER
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
ttgaactttccaaaaaatgtatccataaaagaggtaggtccaagagatggcctacagaat
gaatcggaaatggtaccaactgatgcaaagattgaatggatcaacatgctttcggattct
ggtacatcctatatcgaaatttcatcatttgtacatccggactggataccacagttgaag
gacgcaacagaggtagcaaaaaaaataaagcgtaatcccaatgttacttatgcagcttta
gtccctaacaatacggggctagagcgtgctctagaagtcaatattgatgaggtttgtttg
tttttatcagctagtcaaacgcataacaaaaaaaatattaataaaacaatagaagaaacc
tacccaattttagaaagcgtttccacagagtctaaaagagcaaataaagcgattagaggg
tatgtttcaacggtttttggttgtccctacgaaggtgaaattgatacaaataaggttatc
atgatttgcgataacctgtatacaatgggtgtcgatgaaatatcaataggtgacacaatc
ggtgtagctaatcccgcgcaggttgctagagtactagaacagctattacgttattttcca
aaggaaaaattggctatgcattttcacaacacaaggggaacagctctagcaaatgttctt
gttgcaatgaactatggaattaccaagtttgatagtgcggttggcggactcggtggatgc
ccatatgctaagggcgcttcaggaaatttagctactgatgatctattgtatatgcttcat
cgaatggggataattacaggaattgatgaaaataacatcattgatgcagcattatatatt
gaaaactatgttaaaaatctatcaagtcatcaaatgaaaattttaaaaagtgagcgctaa
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