Virgibacillus necropolis: CFK40_11890
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Entry
CFK40_11890 CDS
T04976
Symbol
mutS
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
vne
Virgibacillus necropolis
Pathway
vne03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
vne00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
CFK40_11890 (mutS)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vne03400
]
CFK40_11890 (mutS)
DNA repair and recombination proteins [BR:
vne03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
CFK40_11890 (mutS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
AAA_14
nSTAND3
AAA_29
AAA_22
nSTAND_NTPase5
AAA_27
Par3_HAL_N_term
AAA_28
Motif
Other DBs
NCBI-ProteinID:
ASN05660
UniProt:
A0A221MDI0
LinkDB
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Position
complement(2469941..2472517)
Genome browser
AA seq
858 aa
AA seq
DB search
MSKYTPMMEQYLGIKADYKDAFLFFRLGDFYEMFFDDAVVAARELEITLTKRDAANDDPI
PMCGVPYHAAANYIKNLIEKGYKVAICEQVEDPKQAKGVVRREVVQLITPGTVMESNMLS
EKENNYIASLSYFKDGSYVIVYNDLSTGENRIALVSNGWDAVIHELYNQPIKEIVISSKM
PPDLQQQLRDKLNVTLSYQDEISFNGEYRSLVDDINDERLVKAFSRLLNYVQHTQKRSLD
HLQPAKIIELKQFLKLDMYSKRNLELTETIIKKGKHGSLLWVLDQTVTSMGSRLLKKWIE
RPLLNKKQIEERLDVVDAFYNGFMERDALREGLKSVYDLERLAGRIAFGNVNGRDLIQLK
QSLAKIPDLLSILNQFGSKQIDKVVKEIHSPNQLVELLANSLVENPPISIKDGSLIKDGY
NETLDKYRDASRNGKQWIKELELQEKQETKIKSLKIGYNRVFGYYIEVTKANLHLLPEGR
YERKQTLTNAERYVTPELKEKEQLILEAEEKSVELEYELFLTIRDQLKAYIPDLQRLAEV
VSKIDVLQSFATVSESNNYKRPSFVKDNLSIKNGRHPVVEQVMKNGEFVPNDIFMDKDSD
VLLITGPNMSGKSTYMRQLALTVLMGQIGCFVPCEDAALTIFDQIFTRIGAADDLVSGQS
TFMVEMLEANHAISNATKNSLILLDEIGRGTSTYDGMALAQAIVEYIHNHIHAKTLFSTH
YHELTTLDQSLARLKNIHVRAEEYEGNVVFLHQIKEGAADESYGIHVAKLAELPEKLINR
ASSILHDFETKDEKKNEVHEDSANQLSFFAEEVPSTRTKTVDRTHESIIVELKKINLFDM
TPLDAMNELSRLQKKLRK
NT seq
2577 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaatatacaccgatgatggaacaatacttaggaataaaagctgactataaggat
gcttttttattttttcgccttggcgatttttatgaaatgttttttgatgatgcagttgtt
gcagccagagaacttgaaataacgttaacgaaacgtgatgcagcaaacgatgatccaatt
ccaatgtgcggagtaccataccacgctgcggcaaattacataaaaaatttaattgaaaaa
ggctataaagttgccatttgtgagcaagtagaagaccctaaacaagcaaaaggtgtggtt
agacgagaagttgttcaattaatcactccagggaccgtaatggaatctaatatgttaagc
gaaaaagaaaataactatattgccagcctttcctattttaaagatggatcttatgtaatt
gtttataatgatctatcgacaggtgaaaacagaattgcacttgtttcaaatggatgggac
gcagtaattcatgaactttataatcaaccaatcaaagaaattgtcatttcgtccaaaatg
ccaccagatcttcagcaacaactcagggataaattgaacgttacattatcctatcaggac
gaaatatcctttaatggtgaatacagaagtttagttgatgatataaatgatgaacgttta
gttaaagcattcagtcggttgttaaattatgtgcaacatacacaaaaacgttcacttgat
catttacaaccggccaaaatcattgagctaaaacaatttttaaagcttgatatgtactcg
aagcgaaatttagaattaacggaaacaataataaaaaagggtaaacatggtagtttacta
tgggttttagatcaaacagtcacttcaatgggctcaaggctgttgaaaaagtggattgaa
cgtccattgttaaacaaaaaacaaatagaagaacggctagatgttgtcgatgcattttat
aatggctttatggaacgtgacgcactaagagaaggtttaaaatcggtatatgaccttgag
cgtttggcaggacgcattgcatttggaaatgtaaacggtagggatttgattcaattaaaa
caatccttagcaaaaattccagatttactatcaattctaaatcaatttggttccaaacag
attgataaggtcgtaaaagaaatacattctccaaatcagttagtagagcttttggcaaat
agtttagttgagaatcctccaatttctatcaaagatgggtcattaatcaaggatggatat
aatgaaaccttggacaagtatcgtgatgcctctagaaatgggaaacagtggattaaagaa
ttggaactgcaagaaaaacaggaaacgaaaattaaatcattgaaaatcggctataatcga
gtattcggttattatatagaggtcactaaggcaaatcttcatctcctaccagaggggaga
tatgaacggaaacaaacgttaacaaatgcagaaagatatgtaacaccagagttaaaagag
aaagaacagcttattttggaagcagaagaaaaaagcgttgaattagaatatgaactattt
cttactattcgtgatcaattaaaagcgtatattcctgatctgcaaaggcttgccgaagta
gttagtaaaatagatgtgttacagtcatttgctaccgtcagtgaaagcaataactataag
cgtcctagttttgtaaaagataatctttccatcaaaaatggacgacatccagtagtcgaa
caagttatgaaaaatggtgaatttgtacctaatgatatttttatggataaagattctgat
gtcctattaattacagggccaaatatgtccgggaagagcacctatatgcgtcaactagcg
ctaaccgtgctcatggggcaaatcggatgctttgtgccgtgtgaggatgctgcgttaact
attttcgatcaaatcttcacgcgaatcggggcagctgatgatttagtatctgggcaaagc
acctttatggtggaaatgcttgaagcaaatcatgcaatctcaaatgctactaaaaatagt
ttgattcttttagatgaaatcggacgtggaacaagtacgtatgatggaatggcgttagca
caggccatcgtcgagtacattcacaatcatattcatgctaagacgcttttttctacccat
taccatgaattaaccacacttgaccagtcactagctaggttgaaaaatattcatgttcgg
gcagaagagtatgaaggtaatgttgtttttttacatcaaataaaagaaggtgcagcagat
gagagctatggaattcacgttgcaaaacttgctgagcttccagaaaaattaatcaatcga
gcatcatcgattttacatgattttgaaacgaaggatgagaaaaaaaatgaagtacatgag
gatagcgcaaaccaattatccttttttgccgaggaagtaccatcaactcgaacgaaaaca
gtagatagaacacacgagtcaattattgtagagctaaagaaaataaacttgtttgacatg
acaccgctcgatgctatgaatgagttgagccgtttgcaaaagaagcttagaaagtag
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