KEGG   Virgibacillus necropolis: CFK40_11920
Entry
CFK40_11920       CDS       T04976                                 
Symbol
rny
Name
(GenBank) ribonuclease Y
  KO
K18682  ribonucrease Y [EC:3.1.-.-]
Organism
vne  Virgibacillus necropolis
Pathway
vne03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:vne00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CFK40_11920 (rny)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:vne03019]
    CFK40_11920 (rny)
Messenger RNA biogenesis [BR:vne03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     CFK40_11920 (rny)
SSDB
Motif
Pfam: RNase_Y_N HD KH_1 HDOD KhpA-B_KH KH_2 FUT8_N_cat
Other DBs
NCBI-ProteinID: ASN05666
UniProt: A0A221MDB2
LinkDB
Position
complement(2477576..2479138)
AA seq 520 aa
MDIITIIISALLALIVGIVVGYLIRKSIAEAKISSAEKLAKQIVDEAHRNADASKKEALL
EAKDENHKLRQQTEQDLRERRNESQKQETRLMQKEENLDRKSETLDKRELMLEKKENSLT
EKQQQIEEMESKVEAMIQMQQTELERISGYTTDQAKQIILERIEQEVTHESALMIKEAEN
RAKEEADKKAKSILSLALQRCAADHVAETTVSVVNLPNDEMKGRIIGREGRNIRTLETLT
GIDLIIDDTPEAVILSGFDPIRRETARMALEKLVQDGRIHPARIEEMVDKARREVDEYIR
EIGEETTFEIGVHGLHPDLVKILGRLKYRTSYGQNVLKHSTEVAYLSGLLAAELGEDERL
ARRAGLLHDIGKAIDHEVEGSHVEIGKELGIKYKEHEVVINAIASHHGDEEATSIISVLV
AAADALSAARPGARSETLENYIKRLEKLEEISESFTGVEKSFAIQAGREIRIIVKPDEIN
DLDSVRVARDIRKRIENELDYPGHIKVTVIRETRTVEYAK
NT seq 1563 nt   +upstreamnt  +downstreamnt
gtggacattattacaataatcatctccgctttgcttgccctaatcgtcggtattgttgtt
ggttatctgattcgtaaatctatagctgaagctaaaatttcaagtgcagaaaaattagca
aagcaaatagtcgatgaagcacatcgaaatgcagatgcttcgaaaaaagaagcacttctt
gaggcgaaggatgaaaatcacaaacttcgtcagcaaacagaacaagatttgcgtgaacga
cgaaatgaatcacaaaaacaagaaactcgtctaatgcaaaaagaagaaaatctggacaga
aaaagtgaaacgcttgataagcgtgagctcatgttagagaagaaagaaaactcactaaca
gaaaaacaacaacaaattgaagaaatggaaagcaaagtggaagctatgatacaaatgcag
caaacggagcttgaacgcatttcaggatatacaactgaccaagctaaacagattatctta
gaacgcatcgaacaagaggtaacacacgaatcagcactaatgataaaagaagctgaaaat
cgtgcaaaagaagaggcagataaaaaagcaaaaagcattctttctttggcgttacagcgt
tgtgcagcagatcatgtagcagaaactactgtatctgtggttaaccttccaaatgatgaa
atgaaagggcggataattggacgtgagggtcgtaacatacgtacattagaaaccttaact
ggtattgatttaatcattgatgatacaccagaggcagtaattttatcaggttttgatcca
attagaagagaaactgctcgtatggcattagaaaaacttgtacaagatggtcgtattcat
ccagctcgaatcgaagaaatggttgataaggctcgtcgtgaagttgatgaatatatacga
gaaattggggaagagacaacgttcgaaatcggagtacatggtctacatccagatcttgtc
aaaatactcggacgtttgaagtatcgtactagctatggacaaaatgtattgaagcattct
acggaagttgcttatctatccggattgctagctgcagagttaggcgaagatgaaaggtta
gcacgtagagcaggactccttcatgatattggtaaagcgattgatcatgaagttgaagga
agccacgtggaaattggaaaagaacttggtataaaatacaaagagcatgaagtggttatt
aatgcaatagcttcccatcacggtgacgaagaagctacttcaattatttctgttttagtt
gcagcagcagatgcgctatcagctgcacgtcctggtgcaagaagtgaaacactagaaaat
tatatcaaacgattagaaaaacttgaagaaatttctgagtcatttacaggtgttgaaaaa
tcattcgcaattcaagctggtcgggaaattcgaattatcgttaaaccagatgaaataaat
gaccttgattccgttcgggttgctagagatatacgaaaacgaattgaaaatgaacttgat
tatcctggtcatattaaagtgactgttatcagagaaacaagaacagtagagtatgcgaaa
taa

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