Virgibacillus necropolis: CFK40_12755
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Entry
CFK40_12755 CDS
T04976
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
vne
Virgibacillus necropolis
Pathway
vne03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vne00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CFK40_12755
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vne03400
]
CFK40_12755
Enzymes [BR:
vne01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CFK40_12755
DNA repair and recombination proteins [BR:
vne03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CFK40_12755
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
Zn_ribbon_PriA
Helicase_C
AAA_30
PIF1
Zn_ribbon_6
AAA_19
T2SSE
SLFN-g3_helicase
DUF7717
nSTAND_NTPase5
ATPase_2
Cas3-like_C_2
DMF_alpha
Motif
Other DBs
NCBI-ProteinID:
ASN05818
UniProt:
A0A221MDQ2
LinkDB
All DBs
Position
complement(2650784..2653195)
Genome browser
AA seq
803 aa
AA seq
DB search
MSIAKVIVDVPAKQINQTFDYAIPSRLEHVLVPGMRVIVPFGPRKIMGFVMEITSISSSH
VKLKEVLDVLDLTPVLTNELLELGQWLAEETVSLFITAYQVMLPQVLKSQYKKELVRMTD
EELDPAMESLFAGRDIVPYEEFAQSTIRYQKLLKAINNGDISVDYLVKSRITKKTETMIK
PAITDHLLEEAYNDMSNKAKKQRELLAYFIQNKEAITKKQLMSKINTSAATIKSLLDKKL
LVSTKMEVYRNPYDDASIERTEPLTLTDQQNQAIKPIKQTIADNSHDVFLLHGVTGSGKT
EIYLQAISDVIENGKEAIVLVPEISLTPQMVHRFKGRFGSDVAVMHSALSSGEKYDEWRK
IYRQKVKVVVGARSAVFAPFENLGIIIIDEEHETSYKQEDQPKYHARDVAIERGNYHHCP
VILGSATPTLESYARAKKGVYQLATLSKRTNEKAMPEVEIVDMRNELHEGNRTMFSRKLK
EKVESCIAKNEQIVLLLNRRGYSTFVMCRDCGHVKECPHCDIALTYHKNSNQLKCHYCSY
EEPMPTICPECSSDLIRYFGTGTQRVEEALTQLIPEARVIRMDVDTTRRKGAHEKLLNQF
GNGEADILLGTQMIAKGLDFENVTLVGVMTADSMLHLPDFRSSEKTFQLLTQVSGRAGRH
ELPGEVIVQTYTPDHYSIELASQYSFTDFYLKEMAMRKTFHYPPYVFLALITVSHPNQVK
VVQTTQKIVQSLLNSVKEETIILGPTPSPMARIKDRYRYQCMVKYKNEPTLRTIIQNIMN
QYEADIRKDDLLISVDMQPYQMM
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
gtgagtatcgcaaaagttatcgtagatgtgccagctaaacaaattaatcagacttttgat
tacgccatccctagtcgtcttgaacatgtgttagtaccaggtatgcgtgttattgttcca
tttggtccaagaaaaatcatgggctttgttatggaaatcacatctatatcatcatcacat
gttaaattgaaagaagtcctagatgtacttgatctaacacctgtattaacaaacgagcta
ttggaacttggccaatggctcgctgaggaaaccgtcagtttatttattactgcttatcaa
gtaatgttacctcaagtactaaagtcacaatacaaaaaagaactagttcgaatgactgat
gaggagcttgaccctgccatggaatcgctttttgcgggtcgcgatattgttccatacgag
gaatttgctcaatcaaccattcgctatcagaaacttttaaaagccattaacaacggcgat
atttcagtagactacctggttaaatcaagaataaccaaaaaaacggaaacaatgattaaa
ccggcaattactgatcatttgctagaggaagcatataatgatatgtcaaacaaagcgaag
aaacaacgagaattactggcatatttcattcaaaacaaagaggctatcacgaaaaaacaa
ttgatgtctaaaattaatacaagtgctgctacgattaaatcattactagataaaaagtta
ttggtttcaacaaaaatggaagtctaccggaacccttatgatgatgcttcaattgagcga
actgaaccacttacgctaactgaccagcaaaaccaagcaattaaacctattaaacaaaca
attgcagataactcacatgatgtttttttattgcatggcgttactggtagtggcaagaca
gaaatttaccttcaagcgattagtgatgttattgaaaatgggaaagaagcaattgtactg
gttcctgaaatttcactcacaccgcaaatggttcatcgtttcaaaggaagatttggttca
gatgttgctgttatgcacagcgcgttgtccagtggcgagaagtatgatgaatggcgtaaa
atctaccgacaaaaggtgaaggtagttgttggtgcgaggtcagctgttttcgctcctttt
gagaacttaggtatcatcattattgatgaagaacatgaaaccagctataaacaagaggat
cagcctaaatatcatgcacgagatgttgcaattgaacgcggtaactatcatcactgtccg
gtaattttaggtagcgcaacacccacgttagaatcctatgctcgagcaaaaaaaggtgta
tatcaactcgcaacgttaagtaaacgaacaaacgagaaagcaatgcctgaagtggaaatt
gttgatatgcgtaatgaattacatgaaggtaatcgaaccatgttttctagaaaattaaaa
gaaaaagttgagtcgtgtatcgcaaaaaatgagcaaattgtccttttattaaacaggcgg
ggttactcgacatttgttatgtgccgggattgtggtcatgtaaaggaatgtcctcattgt
gatattgcgctcacttatcataagaactcaaatcaattaaaatgccattactgttcctat
gaagaaccaatgccgacaatctgtccagaatgttccagtgatttaattcgttattttggg
acaggtacacagcgggttgaagaagcactaacacagcttattcctgaagctagagtaatt
cgcatggatgtggatacgacacgtagaaaaggtgcacatgaaaaactattaaatcaattc
ggaaatggtgaagcagatattttgctaggaacgcagatgatcgccaaagggttagatttt
gagaatgtaacattagttggcgtaatgacagctgactcgatgctccatttaccagacttt
cgttcatcggagaaaacgtttcagctattgacccaggtcagtggacgagcaggtcgacat
gaattacctggtgaggttattgtgcaaacatacacgccagatcattatagtattgagctt
gcgagtcaatatagcttcactgatttctacttgaaggaaatggcaatgcggaagacattc
cattatccaccatatgtatttttagcgcttatcaccgtttctcatcccaatcaagtgaag
gtcgtacaaacaacacaaaaaatagtgcaatcattattaaattcagttaaggaagaaaca
atcattttagggccaacaccatcaccaatggcacgtatcaaagataggtatcgttaccag
tgtatggtaaaatacaaaaatgagcccacattaagaacaatcatacagaacataatgaat
caatatgaggcagatattcgcaaagatgatttattaatttcagttgatatgcaaccatac
caaatgatgtga
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