Virgibacillus necropolis: CFK40_12955
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Entry
CFK40_12955 CDS
T04976
Name
(GenBank) penicillin-binding protein
KO
K08724
penicillin-binding protein 2B
Organism
vne
Virgibacillus necropolis
Pathway
vne00550
Peptidoglycan biosynthesis
vne01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vne00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CFK40_12955
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vne01011
]
CFK40_12955
Peptidoglycan biosynthesis and degradation proteins [BR:
vne01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
CFK40_12955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PASTA
PBP_dimer_2
DUF2633
Motif
Other DBs
NCBI-ProteinID:
ASN05855
UniProt:
A0A221MDY1
LinkDB
All DBs
Position
complement(2699651..2701879)
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AA seq
742 aa
AA seq
DB search
MKKNKTTHFMAGILILLFVSVFLILTGRFMYIQATGEINNVSLEEWADKKRTASYGLDSE
RGKILDSNGMTLAYDRPTFKIKAIVDESHSEDLEEPQHVKNPEKTAEMLAPLLDMKQSEI
LDRINYGIENDKFQVEFGSNGKQLSQELKDKIEDLDLPGIQFDKQSIRYYPNGMFASHII
GFAQKEKGKITGVTGMERQMNDILSGDDGHISYQRDKFGTKLLDPNEVIEKPEDGDNVYL
TINQKIQTLLEDTLTQVNEEYNPERITAIVMDPKTGEIVAMSNRPSYNPNNPSDVENWYN
DAISTPFEPGSTMKMFTWAAAIDSGNYNGDASYLSGSYRALPNIKTIEDHNTDGWGKISF
DEGFRRSSNVAAAKLLWEEMGPETYLNYYKAFEFDQKTGIDLPGEVTGKLVYDYPIEKIT
TSFGQGTTVTPIQQMKAATAIANDGKMLKPFVIKKVVDSSTGKTIKEKSPEVVGQPISKE
TANRVKELLGTVVTGEGGTGKNYKLDDYSVAGKTGTAQIPNPEGGGYLANNGNYVFSFLG
MAPKNDPELMMYVSVKQPELENEAGSVPVSFIFKNVMKNGLHYLNIDPDKEATEKASLVK
VPELNGLNTKDAKDQLSKLGFEHIMVIGNGNEIVNASAQKGEEMIANNRILLITDKPTMP
DMTGWSMREVYKFADLIGLKVEAMGNGYVVKQSIKKGESIKENDYLGVEFKLPEMKKKDE
AEKESIREEQKEEDALNESTEE
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaaataaaacaacacattttatggctggaatattaattcttttatttgtctcg
gtttttttaattttgactggaaggtttatgtacatacaggctactggagaaattaataat
gtttcgttagaggaatgggctgataagaaacgcacagcgtcctatggcctcgattcggag
cggggtaaaattcttgatagtaacggcatgacacttgcatatgatcgacctacatttaaa
ataaaagcaatagtagatgaatctcactcagaagatttagaggagccacagcatgttaaa
aatcccgaaaaaaccgcggagatgctagctcctttattagatatgaagcaaagtgaaatt
cttgatcggattaattacggaattgaaaatgataagtttcaggttgaatttggttcaaat
ggtaaacaactctcgcaagaattgaaggataaaattgaggatcttgacctgcctgggatt
cagtttgataaacaatctattcggtattatcctaatggaatgtttgcgtcgcatataatt
ggttttgctcaaaaagagaaggggaaaattactggagttactggtatggaaagacaaatg
aatgacattttaagtggtgatgatggtcacatttcttatcaacgcgataaatttggtaca
aaattgttggatccaaatgaggtaattgaaaaacccgaagacggtgataatgtatactta
acgattaatcaaaagattcaaacgttattagaggatacacttacacaagtaaacgaggaa
tataacccagaacgtattacagcaatagtaatggatccgaaaacgggtgaaattgtagca
atgagtaatcggccaagctacaatcccaataatccttccgatgttgaaaactggtataat
gatgcgatttcgacaccttttgaacctggatctacaatgaagatgttcacatgggcagcg
gcaattgattctggtaattataatggtgatgcttcgtatttatcaggaagttaccgagct
cttcctaacattaaaacaattgaagaccacaacacagatggatggggtaaaatttcgttt
gatgaaggattcagacgttcctcaaacgttgcagcagcaaaattgctttgggaagaaatg
ggtccagaaacatatctgaattactacaaagcatttgaatttgatcaaaaaacaggaatt
gatcttcccggggaagttactgggaagttagtatatgactatccaatcgaaaaaattaca
acctcttttggacaaggtacaactgttacgccaattcaacaaatgaaggctgcaacagca
attgcaaatgatggaaaaatgctgaagccatttgttattaagaaagttgttgactctagt
actggtaaaacgataaaagaaaaatctccagaagtggtaggacaaccaatctcaaaggaa
acagctaatcgtgtaaaagaattacttggaactgttgtaactggtgaaggtggaactggt
aagaattataagctagatgattattctgttgcaggtaaaacagggacagctcagattcca
aaccctgaaggagggggatatttggctaacaatggcaactacgtcttctcatttttgggc
atggcacctaaaaatgaccctgaattgatgatgtatgtttctgtcaaacaacctgaattg
gaaaatgaagctggttcagtacctgtatcatttatttttaaaaatgtaatgaaaaatggc
ttacattacttaaacattgatccagataaagaagcaacagaaaaagcatcgcttgttaaa
gttcctgaattaaatgggctaaacacaaaagatgcaaaagatcagttatctaagttagga
ttcgagcatataatggttattggtaacgggaatgagattgtaaatgctagtgcccaaaaa
ggggaagaaatgatagcaaacaatcgaattttgttaatcacagacaaaccaactatgcct
gatatgacgggctggtcaatgcgtgaggtatataaattcgctgatttgataggcctgaag
gtggaagcgatgggcaatggctatgtggtgaagcaaagcattaaaaaaggtgaaagcata
aaagagaatgattatttaggtgtagaatttaaattgcctgagatgaagaaaaaagatgaa
gcagaaaaagaaagtatacgtgaagaacaaaaagaagaagatgcactaaacgaatctact
gaagaatag
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