KEGG   Virgibacillus necropolis: CFK40_13210
Entry
CFK40_13210       CDS       T04976                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
vne  Virgibacillus necropolis
Pathway
vne00010  Glycolysis / Gluconeogenesis
vne00020  Citrate cycle (TCA cycle)
vne00260  Glycine, serine and threonine metabolism
vne00280  Valine, leucine and isoleucine degradation
vne00310  Lysine degradation
vne00380  Tryptophan metabolism
vne00620  Pyruvate metabolism
vne00630  Glyoxylate and dicarboxylate metabolism
vne00640  Propanoate metabolism
vne00670  One carbon pool by folate
vne00785  Lipoic acid metabolism
vne01100  Metabolic pathways
vne01110  Biosynthesis of secondary metabolites
vne01120  Microbial metabolism in diverse environments
vne01200  Carbon metabolism
vne01210  2-Oxocarboxylic acid metabolism
vne01240  Biosynthesis of cofactors
Module
vne_M00009  Citrate cycle (TCA cycle, Krebs cycle)
vne_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
vne_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
vne_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:vne00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    CFK40_13210 (lpdA)
   00020 Citrate cycle (TCA cycle)
    CFK40_13210 (lpdA)
   00620 Pyruvate metabolism
    CFK40_13210 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    CFK40_13210 (lpdA)
   00640 Propanoate metabolism
    CFK40_13210 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    CFK40_13210 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    CFK40_13210 (lpdA)
   00310 Lysine degradation
    CFK40_13210 (lpdA)
   00380 Tryptophan metabolism
    CFK40_13210 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    CFK40_13210 (lpdA)
   00670 One carbon pool by folate
    CFK40_13210 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:vne04147]
    CFK40_13210 (lpdA)
Enzymes [BR:vne01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     CFK40_13210 (lpdA)
Exosome [BR:vne04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   CFK40_13210 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 GIDA HI0933_like FAD_oxidored FAD_binding_2 NAD_binding_8 AlaDh_PNT_C FAD_binding_3 3HCDH_N Lys_Orn_oxgnase NAD_binding_9 Amino_oxidase UDPG_MGDP_dh_N Thi4 DAO
Other DBs
NCBI-ProteinID: ASN05902
UniProt: A0A221ME63
LinkDB
Position
complement(2749301..2750710)
AA seq 469 aa
MVVGDFPIELDTLVVGAGPGGYVAAIRAAQLGQKVTIVEKGTLGGVCLNVGCIPSKAMIQ
AGHLTEHAHGNEELGIKTENVSVDFSKVQEWKGKVVNKLTSGVEGLLKGNKVDIVGGEVY
FVDKNTVKVMDEKNSQTYTFNNCVIATGSSPIEIPSFKFSDRVLDSTGALNLKEIPKKMV
VIGGGYIGTELGSAYANFGTEIVILEGTKDILGGFEKQMTQVVKKRLKKKDVSIVTEAMA
KGVEESKDGVKVTYESKGKEETVEADYVLVTVGRRPNTEELGLEQVGIELDDKGLIKIDK
QCRTNIDNIYAIGDIVAGLPLAHKASYEGKIAAEAISGEKAEIDYIGIPAVVFSDPELAS
VGYTEKEAKDAGYKAKASKFPFAANGRALSLNDSDGFLKLITREEDGLVIGAQIAGPNAS
DMIAELGLAIEAGMTAEDIALTIHAHPSLGEITMEAAEVAMGTPIHMMK
NT seq 1410 nt   +upstreamnt  +downstreamnt
atggtagtaggagattttccaatcgaattagacacattagtagttggcgcaggacctggt
ggctatgtagctgccatccgcgctgcacaactaggacaaaaggttacaattgttgaaaaa
ggtactttaggtggggtttgtttaaatgttggatgtattccatctaaagcgatgattcaa
gcaggtcaccttactgaacatgctcatggtaacgaagagcttggcattaaaacggaaaat
gtttctgttgatttctcaaaggttcaggaatggaagggtaaggtcgtaaataaacttact
tctggtgttgaaggattacttaaaggtaataaagtagatattgtaggtggagaagtatat
tttgtagataagaatacagttaaagtaatggatgagaaaaattctcaaacttacacgttt
aacaattgtgtgattgctactggatcatctccaattgaaattccaagcttcaagttttca
gatcgggtacttgattcaactggggcattgaatttaaaagaaatccctaagaagatggta
gtcattggtggaggatatatcggaactgaactgggttctgcgtatgctaactttggaact
gaaatcgttattctagaaggtacaaaagatattcttggcggttttgaaaaacaaatgact
caggttgtgaagaaacgcttgaagaagaaggacgtctctatcgttacggaggctatggct
aaaggcgttgaagaatcaaaagatggtgttaaggtaacatatgaatcaaaaggtaaagaa
gagacagtagaagcggattatgtattggttacagtaggccgtcgtccaaacacagaagag
ttgggcttagaacaagttggaattgagttggatgacaaaggacttataaaaattgataag
caatgccgtacaaacattgataatatttatgcaatcggcgacattgttgctgggcttcca
ctagcacataaagcatcctatgaaggaaaaattgctgctgaagcaattagtggcgaaaaa
gctgaaatcgattatataggcattcctgctgttgtattctctgatcctgagttagcttca
gtaggttacacggaaaaagaagcgaaagatgctggatataaggcgaaagcttctaaattc
ccatttgccgcaaatggtcgtgcgctatctcttaatgatagtgatggattcctaaaatta
attactagagaagaagatggattagttattggggcacaaattgcaggaccgaatgctagt
gacatgatcgctgaattaggtttagctatcgaagctggtatgactgctgaagatattgca
ttaactatccatgcacatcctagtcttggagaaattacgatggaagctgcagaagtggct
atgggtactccaattcatatgatgaaataa

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