Virgibacillus necropolis: CFK40_14985
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Entry
CFK40_14985 CDS
T04976
Symbol
gabD
Name
(GenBank) succinate-semialdehyde dehydrogenase (NADP(+))
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
vne
Virgibacillus necropolis
Pathway
vne00250
Alanine, aspartate and glutamate metabolism
vne00310
Lysine degradation
vne00350
Tyrosine metabolism
vne00650
Butanoate metabolism
vne00760
Nicotinate and nicotinamide metabolism
vne01100
Metabolic pathways
vne01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
vne00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
CFK40_14985 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
CFK40_14985 (gabD)
00310 Lysine degradation
CFK40_14985 (gabD)
00350 Tyrosine metabolism
CFK40_14985 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
CFK40_14985 (gabD)
Enzymes [BR:
vne01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
CFK40_14985 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
CFK40_14985 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
CFK40_14985 (gabD)
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Motif
Pfam:
Aldedh
FAM25
DUF1487
Motif
Other DBs
NCBI-ProteinID:
ASN06234
UniProt:
A0A221MF25
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All DBs
Position
complement(3159633..3161024)
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AA seq
463 aa
AA seq
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MSNKFKVTNPATGDVIEEIKANTEEEIKQAIKNGHESFKKWSKVNAHERSKLLRIWSQKI
QENKESIAEIMTLENGKPLHESLGEVDYATSYIDWYAEEAKRMYGRTIPASSESKRIIVS
KQPIGLVAAITPWNFPAAMMTRKAAPALAAGCTFIVKPAVETPLTTIRLIELAHEAGIPK
DAVQYVNGRGSVVGDLFTSSEYVRKITFTGSTPVGKQLIKNSADTVKHVTMELGGHAPLI
VAEDADLDFAVTQTIGTKFRNAGQTCVCANRIIVHESILDTFAEKLAKEVQKLNLGNGLD
KGTDIGPIINKKGYEKIVSQVNDAIEKGAEVLAGNDYDKDEEKGYFFVHPTVLKNVDSTM
DIMHEETFGPVAPITSFKEIEEAVEIANSTPYGLAAYFFTNNYKTGMYLHDHLDFGIVGW
NDGGPSAAHAPFGGMKESGLGREGGIEGIEPYLETKYLSIGNL
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaataagttcaaagtaactaaccctgctacaggtgacgtaattgaggaaataaaa
gcaaatacagaagaagaaatcaaacaagcaataaaaaatggacatgaaagttttaaaaaa
tggtcaaaagtcaacgcacatgaacggtcaaagttattacgaatatggtcacaaaaaata
caagaaaataaagaatcaatagcagaaataatgacattggaaaacggtaagccattacac
gagtcactgggtgaagttgactatgcaacaagctatattgattggtatgcagaagaagca
aaaagaatgtacgggcgtactattcctgcatccagtgagtcgaaaaggattatcgtcagc
aaacaaccaatcggacttgtggccgccattacaccttggaattttccagctgcaatgatg
actagaaaagctgcacctgctttagcagctggttgtacatttattgttaaaccggcagtt
gaaacacctttgaccaccatacgattaatcgaacttgcacatgaagcagggatcccgaaa
gacgctgtccagtatgtgaacgggagaggtagtgtcgttggtgatttatttacaagtagc
gagtatgtacggaaaatcacctttaccggttctactcctgttggcaagcaattaattaaa
aacagtgctgatactgtaaaacatgtaaccatggaattaggaggacacgctccactgatt
gtagctgaagatgccgatctcgattttgctgtaacacagacaataggaacaaaattcagg
aatgctggacagacgtgtgtctgcgctaaccgcattattgtacatgagagtattctggat
actttcgcagaaaaattggcgaaagaagttcaaaaactaaatttaggaaatggcctcgat
aaaggaacagatattggaccaatcatcaataaaaaagggtatgaaaaaattgtctcgcaa
gtaaatgatgcaatcgaaaaaggggccgaagtattggctggaaacgactacgataaggat
gaggaaaaggggtatttctttgtgcatcccacagtcttaaaaaatgtagattcgaccatg
gacattatgcatgaagaaacatttggtccagtggctccaattactagctttaaagaaatt
gaagaggctgttgaaattgcaaatagtacaccttacggacttgcggcctatttctttacg
aataattataaaacgggtatgtacctacacgatcatctagactttggtattgttgggtgg
aacgatggcggcccttctgcagcacatgctccatttggcggaatgaaggaaagtggactt
ggacgtgaaggtggtatagaaggtattgaaccgtatctagaaacaaaatatttgtctatc
ggtaatttataa
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