Virgibacillus necropolis: CFK40_16360
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Entry
CFK40_16360 CDS
T04976
Name
(GenBank) TetR family transcriptional regulator
KO
K19736
TetR/AcrR family transcriptional regulator, regulator of autoinduction and epiphytic fitness
Organism
vne
Virgibacillus necropolis
Brite
KEGG Orthology (KO) [BR:
vne00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vne03000
]
CFK40_16360
Transcription factors [BR:
vne03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
CFK40_16360
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TetR_N
TetR_C_24
HAD_2
HTH_Tnp_1_2
HTH_7
MerR
HTH_17
LacI
Metal_resist
Cytochrom_C_2
TetR_C_7
CG7065_mid_helical
Phage_T5_Nicking_endo
HTH_22
HTH_23
Motif
Other DBs
NCBI-ProteinID:
ASN06476
UniProt:
A0A221MFN1
LinkDB
All DBs
Position
complement(3442026..3442670)
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AA seq
214 aa
AA seq
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MDKERTSVKAKHNRSPGRPRSSELELPTKEIILKAASRLFLDNGYQHVSVDDVAKLCNVT
KATVYYYYASKAELFTETIVQMMERIREKMHAMLQENIPLRSRLLNVTEAHLKATVDIDM
DGFMKGTKNTLSPEQIKRMHQAEENMHQAIEEAFVDAMAKGEIGEINPTFATQTYLALLK
VGNYKTVDNHSIFPTIEKTAEQINRFFWQGLFPE
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atggacaaggagagaacaagtgtgaaggccaaacataatcgttcgccgggaagaccgcgt
tccagtgagttggaattaccaacaaaagaaattattttaaaggcggcttcccgtcttttt
ttagataacggctatcaacatgtttcggtagatgatgttgcgaaattgtgcaatgtgaca
aaagcaaccgtctattactattatgctagtaaagcggaattatttacggaaacgatagtg
caaatgatggaacgtattcgcgaaaaaatgcatgccatgctgcaagaaaacatcccatta
cgcagtcgtctcttaaatgtgacagaagcacacttgaaagcaaccgttgatatagatatg
gatggttttatgaaagggactaaaaatacattatcaccggaacaaataaagagaatgcat
caggcagaagagaatatgcatcaagcaatcgaagaagcatttgttgatgcaatggctaag
ggcgaaattggtgaaataaacccaacatttgctacacagacatacctagcactattaaaa
gtaggcaattataagacagttgataaccattctatattcccaactattgaaaaaacggct
gaacaaatcaaccgtttcttttggcagggactttttcctgaataa
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