Virgibacillus necropolis: CFK40_17010
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Entry
CFK40_17010 CDS
T04976
Name
(GenBank) 3'-5' exoribonuclease YhaM
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
vne
Virgibacillus necropolis
Brite
KEGG Orthology (KO) [BR:
vne00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vne03019
]
CFK40_17010
Messenger RNA biogenesis [BR:
vne03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CFK40_17010
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GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
Motif
Other DBs
NCBI-ProteinID:
ASN06596
UniProt:
A0A221MG04
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All DBs
Position
complement(3573569..3574516)
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AA seq
315 aa
AA seq
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MNKGLGYINIGDAFDGFVLIKEANRGMASNGKPFLTLILRDSSGEIDAKLWDITKEDEQL
FVAEQIVKLAGEINQFRGKAQLKILSLRPAQSTDDVHVTDFIEKAPVEKEALMEKLTEAI
FEMKNPTMQRIVRAFVKRYQDALLTYPAATKNHHEYVSGLAHHVVSMIALAKELHKLYPQ
INKDLLYAGVILHDLGKLKELSGVITTSYTIEGKLLGHIPMMVEEIGHVARELQIEGEEV
LILQHLVLSHHGKAEWGSPKPPMVREAELLHLIDLIDAKMNMLNRSLEKVKPGEFTERIF
ALDNRSFYKPLFEEQ
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaggattgggttatataaacattggtgatgcttttgatggatttgtactcatt
aaagaagcaaatcggggtatggcaagtaatggtaagccatttttgactttaattctccga
gactcttctggggaaattgatgctaagctatgggatatcacaaaagaggatgaacaacta
tttgttgctgagcaaatcgttaaattagctggagaaatcaatcaatttcgaggtaaggcc
cagcttaagattttatcgttaagacccgcgcagtctactgatgatgtacatgttacagat
tttattgaaaaagctccagtagaaaaagaagcgttaatggaaaaactgactgaagctatt
tttgaaatgaaaaatcctactatgcagaggattgtccgagcatttgttaaaaggtaccag
gatgcactgttaacgtatcctgctgcaacgaaaaatcatcatgaatatgtatcaggcttg
gcacaccatgttgttagcatgatcgcattagcgaaagagttacataagctttacccacaa
ataaataaagacttattgtacgcgggtgttatcctccatgacttaggtaagttaaaagag
ttatctggtgtcattacaacatcttatacaatagagggaaaattgcttggacatattccg
atgatggtagaagaaattggtcatgttgcacgtgagttgcaaattgaaggtgaagaggtt
cttattctacaacatttagttttatcccatcatggaaaagctgaatggggcagtccaaaa
ccacctatggtccgagaagcagaactcttacacttgattgatttaattgatgctaagatg
aatatgctaaatcgttcattggaaaaggtgaagcctggtgagtttaccgaaagaattttt
gcactggataaccgatcattctataaacctttatttgaggaacaataa
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