Virgibacillus necropolis: CFK40_18205
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Entry
CFK40_18205 CDS
T04976
Symbol
gabD
Name
(GenBank) succinate-semialdehyde dehydrogenase (NADP(+))
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
vne
Virgibacillus necropolis
Pathway
vne00250
Alanine, aspartate and glutamate metabolism
vne00310
Lysine degradation
vne00350
Tyrosine metabolism
vne00650
Butanoate metabolism
vne00760
Nicotinate and nicotinamide metabolism
vne01100
Metabolic pathways
vne01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
vne00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
CFK40_18205 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
CFK40_18205 (gabD)
00310 Lysine degradation
CFK40_18205 (gabD)
00350 Tyrosine metabolism
CFK40_18205 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
CFK40_18205 (gabD)
Enzymes [BR:
vne01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
CFK40_18205 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
CFK40_18205 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
CFK40_18205 (gabD)
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Motif
Pfam:
Aldedh
DUF1442
Motif
Other DBs
NCBI-ProteinID:
ASN06815
UniProt:
A0A221MGP9
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All DBs
Position
complement(3846424..3847815)
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AA seq
463 aa
AA seq
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MSNQFKVNNPATGEVIQEVNVHSEEEINQALENGHKAFKKWSKVNAHERSRLLQNWAQKI
QENKAYIAETMTLENGKPLHESLGEVDYATSYIDWYAEEAKRIYGRTIPANTETKRIIVS
HQPIGLVAAITPWNFPAAMMTRKAAPALAAGCTFIVKPAVETPLTTIRLIELAHEAGIPP
DAVQCVNGRGSVVGDLFTSSEYVRKITFTGSTPVGKTLIKNSADTIKHVTMELGGHAPLI
VAEDADLDFAVKQTVGTKFRNAGQTCVCANRIIVHENIVDAFSEKLAVEVEKLKIGNGLE
EGTDVGPIINGKGYEKIVDQINDAIEKGAEVLVGNKYDTDNEKGYYFVHPTVLKNVNASM
DIMHEETFGPVAPITSFKEIKEAVEIANSTPYGLAAYFFTNDYRTGTYLHDHLDFGIVGW
NDGGPSAAHAPFGGMKESGLGREGGLEGIKPYLETKYLSVGNL
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaatcagttcaaagtaaataatcctgctacaggtgaagtcattcaagaagtcaat
gtgcattcggaggaagaaattaatcaagcgctggagaatgggcataaagcttttaaaaaa
tggtcgaaagtcaatgcacatgaacgatcaagattattacaaaattgggcgcaaaaaata
caggaaaataaagcatatatcgcggaaacaatgacacttgaaaacggaaagccactccat
gaatctttgggggaagttgattatgcaactagctatattgattggtatgcggaagaggca
aaaagaatttatggccgcacgattccagcaaatacggaaacaaagcgtattattgtcagc
caccagccaattggactcgttgcggcaattacaccatggaactttcctgcggcgatgatg
acgagaaaggcggcacctgctttagcggcggggtgtacgtttattgttaaacccgcagta
gaaacccctttaacgacaattcgtctaatcgaacttgcgcatgaagccggtattccaccc
gatgcagttcaatgtgtaaatggaagaggtagtgttgttggtgatttattcacaagtagc
gaatatgtacgcaaaattacctttacaggttcaacacctgttgggaagacgttgattaaa
aatagtgcggacaccattaaacatgtcacaatggaattaggtggacatgctcctcttatt
gtagctgaagatgctgaccttgattttgctgtaaaacagacggtcggtacgaaattcagg
aatgctggccaaacatgtgtatgtgccaaccgtattatcgtgcatgaaaatatcgtagac
gccttttctgaaaagctagctgtggaagttgaaaaacttaaaattggcaacgggttggaa
gaaggaacagatgtagggccgatcattaatggaaaaggctatgaaaaaattgtggatcaa
ataaacgatgccattgaaaaaggtgctgaggtactagtcggcaataagtatgatacagac
aatgaaaaaggttattactttgtgcatccaacggtgttaaaaaatgtaaatgccagcatg
gatatcatgcatgaggaaacttttggtccagtagcaccgattaccagctttaaagaaatt
aaagaagcagtggaaattgcaaatagcacaccatacgggcttgcagcttatttctttacc
aatgattatagaaccggaacttacttacatgatcatctcgactttgggattgttgggtgg
aatgacggcggaccatctgctgcacatgcaccttttggaggcatgaaggaaagtggactc
ggacgtgagggtggtttggaaggtattaagccatacttagagacgaaatatttgtcggtg
ggaaatttgtaa
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