Virgibacillus necropolis: CFK40_19255
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Entry
CFK40_19255 CDS
T04976
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
vne
Virgibacillus necropolis
Pathway
vne03420
Nucleotide excision repair
vne03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
vne00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CFK40_19255 (pcrA)
03430 Mismatch repair
CFK40_19255 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vne03400
]
CFK40_19255 (pcrA)
Enzymes [BR:
vne01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CFK40_19255 (pcrA)
DNA repair and recombination proteins [BR:
vne03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CFK40_19255 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
CFK40_19255 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
ResIII
AAA_22
RE_ApaLI
Motif
Other DBs
NCBI-ProteinID:
ASN06997
UniProt:
A0A221MH66
LinkDB
All DBs
Position
complement(4055622..4057841)
Genome browser
AA seq
739 aa
AA seq
DB search
MSQTMDDLLNGLNIEQQQAVKQTDGPLLIMAGAGSGKTRVLTHRIAYLLSEKEVSPRSIL
AITFTNKAAREMRARVSKLVGPESGHIWVSTFHSMCVRILRRDIDRIGYNRNFTILDSGD
QLSVIKQILKNLNIDPKKFEPRAMLGAISNAKNELITPEEYSKNVGNFYDRQIAQVYVAY
QKTLQKNQSLDFDDLIMQTIHLFKRVPEVLESYQRRFQYIHVDEYQDTNHAQYFLVKQLA
SRFQNICVVGDSDQSIYGWRGADITNILTFEKDYPAAKSVFLEQNYRSTKAILSAANKVI
GNNTGRKPKNLWTENDDGKNIHYFQGGTEHEEAFFVTDKIQDLTRQYGYSPNDIAILYRT
NAQSRAIEDTLMKSAVSYQMVGGTKFYERKEIKDMVAYLRLITNPNDDLSFERVVNVPKR
GIGKTSVDRIRAHATEHGISFYETVKEIDFVGVSKKAAQALAEFGALIGSLTQQQEFLTA
TDMVEAVLKRTGYEESLKRENTIESQSRLENLEEFITVTKEFEKTSEEDKTLVTFLTDLA
LIADIDKVEDEEDVTDEKITLMTLHAAKGLEFPVVFLIGLEENVFPHSRAMFDDDEMEEE
RRLAYVGITRAEKELYVTHAKMRTLYGRTNMNPISRFINEIPKELIDGIEEAQAAMFGVR
KPIQDKAAPIKRKAQKLQTTTGAENEAWVTGDKASHKKWGVGTVVKVQGADEAMELDIAF
PAPTGIKRVLAKFAPITKQ
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
gtgagtcagactatggacgacttattaaacggattaaatattgaacaacaacaagcagtg
aaacaaacagatgggcctttattaataatggctggagcaggaagtggcaagacgcgcgtt
ttaacacatcgcatcgcctatttgctaagtgaaaaggaagtatcaccaaggagtattttg
gctattacctttactaacaaagctgctcgcgaaatgagggcacgtgtcagcaaacttgta
gggcctgaaagtggacatatttgggtttccacctttcattcgatgtgtgtgcggatatta
cgtcgggatattgaccgaattggctacaaccgaaatttcactattttagatagtggtgat
cagctatcagtcattaaacaaattttaaagaacctcaatatagatccgaaaaagtttgaa
ccaagagcaatgcttggggcaattagtaatgcaaaaaatgagttaataacacctgaggaa
tatagcaaaaatgtaggtaatttctacgatcgtcaaatagcgcaagtttacgtagcatat
caaaaaacactacagaaaaatcaatccctcgactttgatgacttaattatgcaaacgatc
catttgtttaaacgagttccagaggtattggaaagctatcaacgaagatttcaatacatt
catgttgatgagtatcaggatacgaaccatgctcaatatttcttggtaaagcagcttgca
tcacgcttccaaaatatttgcgttgttggagactccgaccagtccatttacggatggcgc
ggtgctgatattacaaatattttaacctttgaaaaagactatcctgctgcgaaatcagtt
tttctggaacaaaactatcggtcaacaaaagcaattttatcagctgcaaataaagtgatc
ggtaacaatacgggacgtaaaccgaaaaacctttggacggagaatgatgacgggaaaaac
attcactattttcaaggtggaaccgagcacgaagaagcgttttttgttacggataaaatt
caagatctgacacgtcaatatggttattcaccaaatgacattgcaatactttaccgaacg
aatgcgcaatctcgtgcaattgaggatacattaatgaaatcagccgtctcttatcaaatg
gttggtggaacaaaattctatgagcgaaaagaaatcaaggacatggttgcgtacttgcgt
ttaataacgaatcctaacgatgatttaagctttgagcgagtagtgaatgtaccaaagcgt
ggtattggaaaaacttctgttgaccgcattcgcgcacatgctacagagcatggtatttcc
ttttatgaaactgtgaaggaaattgactttgtaggtgtttcaaaaaaggctgcacaggca
ctcgcagaatttggtgcattgattggttcactcacgcagcaacaggaatttttaacagca
accgatatggttgaagcggttttaaagcggacaggctatgaagaatcattaaaaagagag
aatacaattgaatcacaaagtaggttagaaaacttagaagagtttataacagttacaaag
gaatttgaaaaaacgagcgaagaagacaaaacgcttgtaacatttctgactgacttagcc
ttgatagctgatattgataaggtggaagacgaagaagatgtaacggatgaaaaaattacg
ctgatgaccttacatgcagctaaaggacttgagtttcctgttgttttcttaattgggtta
gaggagaatgtatttccacatagtcgggccatgtttgatgatgatgaaatggaagaagag
cgtagacttgcttatgtcggaattactcgagctgaaaaagaactatatgtaacacatgca
aaaatgcgtacactatatggtagaacaaacatgaatccgattagtcgatttataaatgaa
atacctaaagagcttatcgatggaatagaagaagcacaggcggccatgtttggcgtgcgt
aagccgatacaagataaggctgcaccaataaaacgaaaagcgcaaaaactacaaacaaca
actggtgccgaaaatgaggcatgggtaactggtgataaagcatcccataaaaaatggggt
gttggaactgtcgtgaaagttcaaggtgcagatgaagcaatggaacttgatattgccttc
ccagcgccaaccggtattaagcgggtattagcaaaatttgctccaattacgaaacaatag
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