Virgibacillus necropolis: CFK40_19565
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Entry
CFK40_19565 CDS
T04976
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
vne
Virgibacillus necropolis
Pathway
vne03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vne00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CFK40_19565 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vne03019
]
CFK40_19565 (groL)
03110 Chaperones and folding catalysts [BR:
vne03110
]
CFK40_19565 (groL)
03029 Mitochondrial biogenesis [BR:
vne03029
]
CFK40_19565 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vne04147
]
CFK40_19565 (groL)
Enzymes [BR:
vne01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
CFK40_19565 (groL)
Messenger RNA biogenesis [BR:
vne03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
CFK40_19565 (groL)
Chaperones and folding catalysts [BR:
vne03110
]
Heat shock proteins
HSP60 / Chaperonin
CFK40_19565 (groL)
Mitochondrial biogenesis [BR:
vne03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
CFK40_19565 (groL)
Exosome [BR:
vne04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
CFK40_19565 (groL)
Exosomal proteins of other body fluids (saliva and urine)
CFK40_19565 (groL)
Exosomal proteins of breast cancer cells
CFK40_19565 (groL)
Exosomal proteins of colorectal cancer cells
CFK40_19565 (groL)
Exosomal proteins of bladder cancer cells
CFK40_19565 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
ASN07057
UniProt:
A0A221MHC8
LinkDB
All DBs
Position
complement(4126315..4127955)
Genome browser
AA seq
546 aa
AA seq
DB search
MAKEIKFSEDARRAMLRGVDTLADAVKVTLGPKGRNVVLDKKFGSPLITNDGVTIAKEIE
LEDHFENMGAQLVSEVASKTNDVAGDGTTTATVLAQAMIREGLKNVASGANPVGVRRGIE
KAVELAVRELQSISKPIESKESIAQVAAISSGDDEVGNLIAEAMERVGNDGVITIEESKG
FNTELEVVEGMQFDRGYSSPYMVTDQDKMEAILEDPYILITDKKIGNIQEVLPVLEQVVQ
QGKPLLLVAEDVEGEALATLVVNKLRGTFNAVAVKAPGFGDRRKAMLEDLATLTGAEVIT
EDLGLDLKSTTIEQLGRASKIVVTKDTTTVVEGSGNPEAISSRVAQIRAQAEESTSEFDK
EKLQERLAKLAGGVAVIKVGAATETELKERKLRIEDALNSTRAAVEEGIVAGGGTALVNV
YKQVSELNLTGDEATGANIVRRALEEPVRQIAHNAGLEGSIIVERLKGESVGVGFNAASG
EWVNMVEAGIVDPTKVTRYALQNAASVAAMFLTTEAVVADLPEESAGGAGGGMPDMGGMG
GMGGMM
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggctaaagaaattaaatttagtgaagacgctcgccgagcaatgttacgcggtgtagat
acattagcagatgcggtaaaagtaacacttgggccaaaaggtcgcaacgttgttttagat
aaaaaattcggttcacctttaattacaaatgatggtgtaacaattgcaaaagaaattgaa
ctagaagatcatttcgaaaatatgggtgcacagcttgtatctgaagtagcatcaaaaaca
aatgatgttgctggtgatggtacaacaactgcaactgtgttagcacaagcaatgatccgt
gaaggacttaaaaacgttgcatctggagcaaacccagttggcgttcgtcgtggaattgaa
aaggctgtagaacttgcagtaagagaacttcaatctatttcaaaacctatcgaaagcaaa
gaatctattgcacaagttgcagctatttcatcaggtgatgatgaagtaggtaaccttatt
gcagaagcaatggaacgtgttggtaatgatggtgttatcacaattgaagagtcaaaaggc
tttaacacggaactagaagttgttgaaggtatgcaatttgaccgtggctattcttctcca
tacatggttactgaccaagataaaatggaagcaatactagaagatccatatattttaatc
acagataagaagattggtaacatccaagaagtattaccagtattagagcaggtagtacaa
caaggtaaaccacttctattagtagctgaagatgttgaaggtgaagcacttgcaacacta
gttgtgaacaagcttcgcggaacatttaatgcagttgcagtaaaagctcctggatttggt
gatcgtcgtaaagcaatgcttgaagaccttgctacattaacaggcgctgaagtaatcaca
gaagatctaggacttgatcttaagagtactacaattgaacaactaggtcgcgcatctaaa
attgttgttacaaaagatacaacaacagtagtagaaggatctggtaacccagaagcaatt
tcttctcgtgtagcacaaattcgtgcacaagctgaagaatctacttctgaatttgataaa
gaaaaattacaagaacgtcttgctaaactagcaggcggtgtagcagtcatcaaagttggt
gctgcaactgaaacagaattaaaagagcgtaaattacgtattgaagatgcattaaactct
actcgcgcagctgtcgaagaaggtatcgtagctggtggtggtactgctctagtaaacgtc
tacaaacaagtaagtgaattaaatctaactggtgacgaagctactggtgctaacatcgta
cgccgtgctcttgaagaaccagttcgccaaattgcacacaacgctggccttgaaggttct
attattgtagaacgtcttaaaggtgaaagtgttggtgtcggattcaacgcagcatctggc
gagtgggtaaacatggttgaagctggtatcgttgatccaacaaaagtaactcgttacgca
ctacaaaacgcagcatctgtggcagcaatgttcctaactacagaagctgtagtagcagat
cttccagaagaaagtgctggcggtgcaggtggcggaatgcctgacatgggcggtatgggt
ggaatgggcggcatgatgtaa
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