Virgibacillus necropolis: CFK40_19785
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Entry
CFK40_19785 CDS
T04976
Symbol
sigB
Name
(GenBank) RNA polymerase sigma factor SigB
KO
K03090
RNA polymerase sigma-B factor
Organism
vne
Virgibacillus necropolis
Brite
KEGG Orthology (KO) [BR:
vne00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vne03021
]
CFK40_19785 (sigB)
Transcription machinery [BR:
vne03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CFK40_19785 (sigB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
GerE
HTH_23
Sigma70_ECF
UPF0122
IF2_N
DUF134
DUF1492
Motif
Other DBs
NCBI-ProteinID:
ASN07079
UniProt:
A0A221MHK2
LinkDB
All DBs
Position
complement(4158088..4158879)
Genome browser
AA seq
263 aa
AA seq
DB search
MATKSRPHNKGSDEVYQWIEHLKENPDDSEVKEKVVLTYKDLVSSIARKYSKNSGIHEDL
VQVGMIGLLAAIRRFDASFGKSFESFAIPTIIGEIKRFIRDKTWSVHVPRRIKELGPKIR
KAVDELTIMDQRSPSVREIAEYLEVSEEDILETMEMGKSYKALSVDRKVEADSDGSTVAI
LDLVGSDENGYDNIDQKMLLEKILPVLTEREQEILRCTYFDNLSQKETGELLDISQMHVS
RLQRRALLKLREAIQSESTEVFD
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccaaatctcgtccacacaataagggtagtgatgaggtttaccaatggatcgaa
catctaaaagaaaatcctgatgatagtgaagtcaaagaaaaagtcgttttaacgtataaa
gatcttgtgtcttctattgctagaaagtattcaaaaaatagtggcatacatgaagatctt
gtgcaggttggaatgattggtttattggctgctattcgaaggtttgatgcgagttttggt
aaatcatttgagtcttttgcaattccaactataattggtgaaattaagcgatttatccgt
gataaaacatggagtgtccatgttccgcgtcgaataaaggaacttggaccgaaaataaga
aaagctgtagatgaattaacaattatggatcaacggtctccctctgtacgtgaaattgcc
gagtacttagaggtatctgaagaagacattttagaaaccatggaaatgggcaagagctat
aaagcattgtctgttgatcgaaaagtggaagcggactcagatggaagcactgtagcgatt
ttggatttagtgggaagtgacgaaaatggctatgataatatagatcagaaaatgttgctt
gagaaaattttaccggttcttactgaaagggaacaagaaattttgcgttgtacgtatttt
gataacttaagtcaaaaggaaacaggtgaactgctggatatttctcaaatgcatgtttca
aggttacaacgacgtgcactacttaaacttcgcgaagctattcagtccgaaagtacggag
gtttttgattga
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