Vibrio nigripulchritudo: VIBNI_A0003
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Entry
VIBNI_A0003 CDS
T02871
Symbol
recF
Name
(GenBank) DNA replication and repair protein recF
KO
K03629
DNA replication and repair protein RecF
Organism
vni
Vibrio nigripulchritudo
Pathway
vni03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vni00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
VIBNI_A0003 (recF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vni03400
]
VIBNI_A0003 (recF)
DNA repair and recombination proteins [BR:
vni03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
VIBNI_A0003 (recF)
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Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_15
AAA_21
AAA_23
AAA_27
AAA_29
ABC_tran
AAA_16
cobW
DO-GTPase2
AAA_13
Motif
Other DBs
NCBI-ProteinID:
CCO56227
UniProt:
U4K820
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All DBs
Position
1:2638..3717
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AA seq
359 aa
AA seq
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MPLTRLIVQQFRNIEACDVELSPGFNFLVGPNGSGKTSVLEAIYLLGHGRSFKSSLTGRV
IQNECDELFVHGRFLNPDQFELPIGINKQRDGSTEVKIGGESGQKLAQLAQVLPLQLIHP
EGFELLTDGPKFRRAFIDWGVFHTEPHFYDAWGRFKRLNKQRNALLKTATHYRELSYWDQ
QMATLAENISQWRKEYVENMAKVAEEICRTFLPEFDIQLKYYRGWDKDTPYQDILENNFE
RDQSLGYTFSGPNKADLRIKVNGTPVEDVLSRGQLKLMVCALRVAQGQHLTEMTGKQCIY
LIDDFASELDSQRRQRLADCLKATGAQVFVSSITESQIVDMLDENGKMFHVEHGTIEQG
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgccactcaccagactgattgttcagcaatttcgtaatattgaagcctgtgatgtcgaa
ctgtcaccaggctttaattttcttgtgggaccgaacggcagtggcaaaaccagtgtgctg
gaagccatctatctgcttggtcatggtcgttcattcaagagctcactcacggggcgagtt
atccaaaacgagtgcgatgaactctttgttcatgggcgttttttgaacccggatcaattt
gagcttccgattgggattaataagcagcgcgatggctctacagaggttaaaataggcggt
gagtccggacaaaaactggcgcagctagctcaggttttgccgttacaactgatacaccct
gaagggtttgaattgctcacagatggacccaaatttcgacgtgcgtttatcgactggggt
gtgtttcacactgaacctcatttttacgatgcatgggggcgatttaaaaggctcaacaag
cagcgtaatgcgctgttgaaaactgctactcattaccgggagctcagctactgggatcag
cagatggcaacgttggctgaaaacatcagccagtggcgcaaagaatacgttgaaaatatg
gcaaaagtggcggaggaaatctgtcgcacatttttgccagaatttgatatccaattgaag
tattatcgagggtgggacaaagataccccctatcaggatatcctcgaaaacaacttcgaa
cgcgatcagtcactcgggtacacctttagtggacccaacaaggcagatttaagaatcaaa
gtgaatgggacgcctgtggaagacgttctgtcacgcggtcagctgaaactcatggtgtgt
gcgctaagagtcgcgcaggggcagcatttgactgaaatgaccggaaagcagtgtatctac
ctgatagatgattttgcttctgaattagatagccaacgtcgccagcggttagccgactgc
ttaaaagcgacgggggcacaagtatttgtaagttctattactgagagtcaaatcgttgat
atgctcgacgaaaatggcaaaatgtttcatgtggaacacggtacgatagagcaaggataa
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