Vibrio nigripulchritudo: VIBNI_A0139
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Entry
VIBNI_A0139 CDS
T02871
Symbol
mutS
Name
(GenBank) DNA mismatch repair protein mutS
KO
K03555
DNA mismatch repair protein MutS
Organism
vni
Vibrio nigripulchritudo
Pathway
vni03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
vni00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
VIBNI_A0139 (mutS)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vni03400
]
VIBNI_A0139 (mutS)
DNA repair and recombination proteins [BR:
vni03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
VIBNI_A0139 (mutS)
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Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
MutS_IV
MutS_C
FCD
AAA_14
Motif
Other DBs
NCBI-ProteinID:
CCO56347
UniProt:
U4K8E5
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Position
1:complement(131343..133910)
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AA seq
855 aa
AA seq
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MTTSTATQKHTPMMQQYLKLKAENPDILLFYRMGDFYELFYDDAKRASQLLDISLTKRGS
SAGEPIPMAGVPFHAVEGYLAKLVQLGESVAICEQIGDPATSKGPVERKVVRIVTPGTVT
DEALLAERVDNLIAAIYSHDGKFGYATLDMTSGRFQLMEPETEEAMSAELQRTSPKELLF
PEDFEAVHLMASRNGNRRRPVWEFELDTAKQQLNQQFGTKDLVGFGVEHAELGLCAAGCL
IQYVKDTQRTALPHIRSLTYDRQDHSVILDAATRRNLEITQNLAGGTDNTLAEVLDHTAT
AMGSRMLKRWLHQPMRQLDTLNQRLDAITEIKDTALFGDLHPVLKQIGDIERILARLAIR
SARPRDLARLRHAMQQLPELSEILGQVNHSYLGKLAGFTAPQDELCDLLERAIKENPPVV
IRDGGVIAEGYNAELDEWRKLADGATEYLEKLEADERDRHGIDTLKVGYNNVHGFYIQVS
RGQSHLVPPHYVRRQTLKNAERYIIPELKEHEDKVLNSKSKALAIEKQLWEELFDLLLPH
LESMQNLASALSQLDVLQNLAERAESLDYCKPTLNEDIGVRIQAGRHPVVEQVMDEPFIA
NPIELGEQRKMLIITGPNMGGKSTYMRQTALIALMAHIGSYVPAESATIGSIDRIFTRIG
ASDDLASGRSTFMVEMTETANILHNATDRSLVLMDEIGRGTSTYDGLSLAWASAEWLAKQ
ISAMTLFATHYFELTELPNQIPTLANVHLDAVEHGDTIAFMHAVQEGAASKSYGLAVAGL
AGVPKTVIKNARAKLNQLEQLTNDQPTTPNQVDVANQLSLIPEPSDIELALADIDPDDLT
PRQALDALYRLKKML
NT seq
2568 nt
NT seq
+upstream
nt +downstream
nt
gtgaccaccagcaccgcgacgcagaaacacacgccgatgatgcaacagtatcttaagctc
aaggcggaaaatcccgatatcttgcttttctatcgtatgggggatttttacgagttattt
tacgacgacgcgaaacgtgcttctcagttactggatatctccttaaccaagcgtggttct
tctgctggtgaaccaattccaatggctggcgtaccttttcatgcagtagaaggttacctg
gcgaagctggtccagcttggtgaatcagtcgcgatttgtgagcagattggcgacccagcc
accagcaaaggtccggtggaaagaaaggttgtccgcatagttaccccaggtacagtaacc
gacgaagccttactggctgagcgtgttgataacctgatcgcagccatctacagtcacgat
ggtaagttcggctacgcaacattagacatgacttcaggtcgcttccagttgatggagcca
gaaactgaagaggcgatgtcagcagaattacagcgcacctctccaaaagaattattgttc
ccagaagatttcgaagcggtgcatttgatggcaagccgaaatggtaatcgccgccgccct
gtctgggaatttgaattagatacagcgaaacagcagcttaaccagcaatttggcactaaa
gatctggtcggttttggagtagaacacgctgaacttggtctgtgtgccgcgggctgtttg
attcagtatgtaaaagacacgcaacgcacggccttgcctcacatccgctcactgacatac
gaccgacaagaccattcggtcattttagatgctgccacgcgccgcaatctagaaattaca
caaaacttagcaggcggaaccgataatacgctggccgaagtgcttgaccacactgcaacg
gcaatgggcagccggatgctgaagcgttggttacaccagccaatgcgccagctcgatact
ctcaaccagcgccttgacgccattaccgaaatcaaagacaccgcgctgtttggcgactta
catccagtgcttaaacaaatcggtgatattgagcgcatcttagctcgcttggcaattcgt
agtgctcgcccacgcgatttggctcgccttcgtcatgccatgcagcagcttcctgagctt
tcggagattcttggtcaggttaaccactcataccttggcaagcttgcaggttttaccgca
ccacaagatgaactttgcgacttgctagagcgtgccattaaagaaaacccacctgtggtg
attcgtgatggcggagtgattgcagagggttataacgccgagctggatgaatggcgaaag
ctggctgacggtgcaactgaataccttgaaaaactggaagccgatgagcgcgatcgccac
ggcattgataccctaaaagtgggatacaacaatgttcacggtttctacattcaagtaagc
cgtggccagagccaccttgttcctcctcattatgtacgtcgccagacactgaaaaatgcc
gaacgctacatcatcccggaactgaaagaacacgaagataaggtcttaaattctaaatcc
aaagcactggcgattgaaaaacagctttgggaagaactgttcgatcttctgcttccacat
ttagaatcaatgcaaaacctagcttctgccttgtcacaactggatgttctacaaaaccta
gcggagcgcgcagagagcttagattactgtaagccaacactgaacgaagacattggcgtt
cgaattcaggctggtcgccatccggtggtggaacaggttatggacgaacctttcattgct
aaccctattgagctgggtgaacagcgtaaaatgctgatcatcacgggacccaacatgggt
ggtaaatcgacctacatgcgtcagaccgcactgattgcgttgatggcacatattggttct
tacgtgcccgctgagtctgccaccataggttctattgatcgtatattcactcgtattggc
gcatcggacgatctggcatctggtcgctctacctttatggtggaaatgaccgaaaccgca
aatattctgcacaatgccacagatcgaagcctggttttgatggatgaaattggtcgtgga
accagtacttacgatggtttatcactggcgtgggcgagtgcagagtggctggctaaacag
atcagtgcgatgactttattcgctactcactattttgagttaaccgaattgccgaatcag
atcccaacgctggcgaacgtccacttagatgcagttgagcacggtgacactatcgccttt
atgcacgctgtacaggaaggagcggcaagtaaatcttatggtctggcagtggctggtttg
gccggtgtacccaaaaccgtgatcaagaatgcgcgagcgaaattgaaccaattggaacaa
cttactaacgatcaaccaacgacgccaaaccaagtggacgtggcgaatcaattgagccta
attccggagccgagtgatattgagctagcacttgcggatattgatcctgatgatctcacg
ccaaggcaagcactggatgcgctgtatcgattgaagaagatgctgtga
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