Vibrio nigripulchritudo: VIBNI_A0180
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Entry
VIBNI_A0180 CDS
T02871
Symbol
pdhR
Name
(GenBank) Pyruvate dehydrogenase complex repressor
KO
K05799
GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
Organism
vni
Vibrio nigripulchritudo
Brite
KEGG Orthology (KO) [BR:
vni00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vni03000
]
VIBNI_A0180 (pdhR)
Transcription factors [BR:
vni03000
]
Prokaryotic type
Helix-turn-helix
GntR family
VIBNI_A0180 (pdhR)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GntR
FCD
MarR_2
HTH_DeoR
HTH_11
MarR
Fe_dep_repress
HTH_24
HTH_Crp_2
HTH_28
TrmB
HTH_41
Penicillinase_R
HTH_IclR
HTH_36
PaaX
TFIIE_alpha
HTH_10
Motif
Other DBs
NCBI-ProteinID:
CCO56386
UniProt:
U4K1H7
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All DBs
Position
1:178825..179595
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AA seq
256 aa
AA seq
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MAYQRIRQPKLSDVIEQELERLILEGTLSPGEQLPPERELAKQFDVSRPSVREAIQRLEA
KRLLTRRQGGGTFVSESLWKSFSDPLLNLLSTHSETQLDLLEARHAMEGLSAYFAALRGT
DEDFERIQLCLEQIRQAQEKKDVEAEASAVMAFLIALTEAAHNVVLLHIVRSLSPLLEQN
VLQNLKLLHRRDEVVDRVSKHRANIVDAIVSGHPEKAREMSHSHLAYIEETLLDLTREES
RRERSLRRIQRGNEPS
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atggcttatcaaaggattcgtcagccgaaactctccgatgtcattgagcaggagttggag
cggttgatattggaaggaacactttctccgggcgagcaattgccgccggaaagggagtta
gcgaaacaatttgatgtttcacgtccttctgtccgagaagcaattcagaggctggaagca
aagcgtttgttaacccgtcgtcaaggtggtggaaccttcgtgagtgaatctctttggaag
agcttctccgatcctttactgaatttattgtccacccattctgaaacccaactggacttg
ttggaagcgcgccatgcgatggaagggctttctgcatactttgcggcattacgtggtacc
gatgaagacttcgagcgaattcagctttgtttagagcaaattcgccaggcgcaagagaag
aaagacgtagaagcagaagcctctgcggtaatggcgtttctgattgccttaaccgaagcg
gcgcataacgtggtattgctccacattgtgcgtagcttgtctcctttgcttgagcagaat
gtcttacagaatttaaagctattgcaccgccgcgatgaagtggtggatagagtcagtaaa
cacagagctaatattgtggatgcgattgtttcaggtcaccctgagaaggcgcgtgaaatg
tctcattcacacttagcttatatcgaagaaacattgttggatttgactcgtgaggagtca
cgaagagaacgctctttgcgtcgaattcaacgaggtaatgagccgtcataa
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