Vibrio nigripulchritudo: VIBNI_A0218
Help
Entry
VIBNI_A0218 CDS
T02871
Name
(GenBank) putative methyltransferase
KO
K07056
16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:
2.1.1.198
]
Organism
vni
Vibrio nigripulchritudo
Brite
KEGG Orthology (KO) [BR:
vni00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vni03009
]
VIBNI_A0218
Enzymes [BR:
vni01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.198 16S rRNA (cytidine1402-2'-O)-methyltransferase
VIBNI_A0218
Ribosome biogenesis [BR:
vni03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
VIBNI_A0218
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TP_methylase
RsmI_C
Motif
Other DBs
NCBI-ProteinID:
CCO56424
UniProt:
U4K1B1
LinkDB
All DBs
Position
1:223870..224733
Genome browser
AA seq
287 aa
AA seq
DB search
MTDNNSSPSEISTLYIVPTPIGNLGDITQRAIEVLSSVDLIAAEDTRHTGKLLSHFNIST
KTYALHDHNEQQKAQVLVDKLQQGLSIALVSDAGTPLISDPGYHLVNQCRQAGVKVVPLP
GACAVVTALSAAGLPSDRFSFEGFLPPKSKGRKDKFLEITKAERTCIFYESPHRIMDSLQ
DMLDILGPDREVVLARELTKTYETIQGMPLGELIPWIEEDDNRKKGEMVLLIHGFREQAS
DEIPDEVTRTLTILTKELPLKKAAAMTAEIYNLKKNALYKWGLANLD
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgacagacaacaattcttccccgtctgagatctcaactctttatattgttcccacccca
atcggaaatttgggagacattacgcagcgagccatagaggtattgtccagtgtcgatttg
atcgcggctgaagatacgcgccatactggcaagttactctctcacttcaacatttcgact
aaaacctatgcgttgcatgatcacaatgaacagcagaaagcgcaagtcttagtcgataag
ttgcagcaagggctgtctattgcactggtttccgatgcaggaacacctttgatcagtgac
ccaggttatcacttggtcaatcaatgtcgtcaggcgggtgtcaaggttgtgccattacct
ggtgcatgcgctgtggtgactgccttgagcgcagcagggctgccgtctgaccgattcagt
ttcgaaggttttcttccacctaagagtaaaggacgcaaggataagttcctggaaattacc
aaagctgaacgtacctgtattttctacgaatcccctcaccgcatcatggattcccttcag
gatatgctggacattcttggtcctgatagagaagtggtgcttgcgcgtgaactcaccaaa
acttacgagaccattcagggaatgccattaggtgaactgatcccatggattgaggaagat
gataatcgtaagaaaggtgaaatggtgctgcttatccatggctttcgtgagcaagcttcc
gatgaaatccctgatgaagttacccgcacattaactattctgacaaaagagctgcctttg
aagaaagccgcagcgatgacggcagagatttacaacctgaagaaaaacgccctctacaaa
tggggactggcgaatctcgactag
DBGET
integrated database retrieval system
