Vibrio nigripulchritudo: VIBNI_A0227
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Entry
VIBNI_A0227 CDS
T02871
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoylalanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
vni
Vibrio nigripulchritudo
Pathway
vni00470
D-Amino acid metabolism
vni00550
Peptidoglycan biosynthesis
vni01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vni00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
VIBNI_A0227 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
VIBNI_A0227 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vni01011
]
VIBNI_A0227 (murD)
Enzymes [BR:
vni01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
VIBNI_A0227 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
vni01011
]
Precursor biosynthesis
Amino acid ligase
VIBNI_A0227 (murD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MurD-like_N
Mur_ligase_M
Mur_ligase_C
NAD_binding_9
DAO
3Beta_HSD
NAD_binding_7
TrkA_N
Motif
Other DBs
NCBI-ProteinID:
CCO56432
UniProt:
U4K8M5
LinkDB
All DBs
Position
1:232369..233703
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AA seq
444 aa
AA seq
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MTAKNNWNNINEVVVVGLGITGLSVVNHLLRQEKSLNIRVIDTRENPPGLERLADTVELH
SGSWNEQWLAEADLIVANPGIALATPEIQTAIKLGIPVVGDIELFGWAVTKPVIAITGSN
GKSTVTDLTGVMANAAGCKTKVGGNIGVPALDLLLEDADLYVLELSSFQLETTSNLSLKA
AAYLNLTEDHMDRYDDLAAYGNAKQRIFLNAEKAIVNQQDSSTHPFSGFDGQVVTFAPSQ
ADYQLKEVEGTTYLSKGEDAFISTSSLSIVGQHNSMNALVAMALLDAVGIDFKKAEDALK
NYAGLTHRCQVVAKSHGVTWVNDSKATNLASTLAALSGLQCDGTLHLLVGGDGKGADFSE
LEPMLAELPVQLHCYGRDGSDFMNLHSSAKRWESIGDVLENITADLGKGDIVMLSPACAS
FDQYPNFMTRGDAFTKLAQHYASS
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
gtgacggcaaaaaataactggaataatatcaacgaagtggtcgttgtcgggcttgggatt
acagggctatccgtagttaaccaccttcttcgacaagaaaagtctctgaacatcagagtg
attgatacgcgagaaaaccctccgggattagaacggttggcagacacggttgaattgcac
tctggaagttggaacgaacaatggctggcagaagccgatctgattgtcgctaaccccggt
attgcgttagcgactccagagattcaaaccgcgatcaaactgggtattccagtggttggt
gatattgagttgtttggctgggcagtcactaaacccgttattgccatcacaggttcaaac
ggcaagagtaccgtgacagatttgacaggtgtaatggcgaatgctgctgggtgcaaaacc
aaagtcgggggcaatattggggttcctgcattggatttgcttttggaagacgcggactta
tacgtgttagagctttccagtttccagttagaaaccacctctaacctttcgctcaaagcc
gctgcttatctgaatctgaccgaagatcacatggaccgctatgacgacttagcggcatat
ggaaacgccaagcagcgaatcttcctcaatgccgaaaaagccattgtgaatcaacaagac
agttcgacacatcctttttctggctttgatggtcaggtcgtcacttttgcgccaagccaa
gccgactatcaattgaaagaagtggaaggtacaacgtatctttcgaaaggggaagacgct
tttatttcgacttcttcacttagtattgtcggacagcacaacagcatgaatgcgttggta
gcaatggcattgctggatgcagttggcattgattttaaaaaagcggaagacgctctaaag
aactacgcgggtctgacacaccgttgccaggtcgttgccaaatcccatggtgtaacctgg
gttaatgactcaaaagcaacgaacttagccagtacattggcggcactgtctggtttacag
tgtgatggtactttacatttgctggtgggcggagatggaaaaggcgcggacttttctgag
ctagaacctatgctcgctgagcttccggttcagttgcattgctatggaagagacggcagc
gattttatgaatctgcattcttccgctaagcgatgggagtccattggtgacgtattggag
aatatcaccgcagacttaggcaagggagatattgtcatgttgtccccagcgtgtgccagc
tttgaccagtatccgaatttcatgacgcgtggcgatgcctttaccaagcttgcccagcat
tatgcgtcttcgtga
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