Vibrio nigripulchritudo: VIBNI_A0321
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Entry
VIBNI_A0321 CDS
T02871
Symbol
lysS
Name
(GenBank) Lysyl-tRNA synthetase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
vni
Vibrio nigripulchritudo
Pathway
vni00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
vni00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
VIBNI_A0321 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
vni01007
]
VIBNI_A0321 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vni03016
]
VIBNI_A0321 (lysS)
Enzymes [BR:
vni01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
VIBNI_A0321 (lysS)
Amino acid related enzymes [BR:
vni01007
]
Aminoacyl-tRNA synthetase
Class II (A)
VIBNI_A0321 (lysS)
Transfer RNA biogenesis [BR:
vni03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
VIBNI_A0321 (lysS)
Prokaryotic type
Other AARSs
VIBNI_A0321 (lysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
CCO56522
UniProt:
U4K8V4
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All DBs
Position
1:346070..347602
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AA seq
510 aa
AA seq
DB search
MTDAVQNETQLEAHSQEENKLIAERRAKLDEIRKTCNANGHPNDFRRDSLAGDLQKEFGE
KSKEELEELNHVVAIAGRIMAKRGPFLVIQETSGRIQAYAAKDVQKELKAKYQGLDIGDI
IGVKGALHKSGKGDLYVNMEEYELLTKALRPLPEKFHGLTDQEMRYRQRYVDLIVNEDSR
QAFIIRSKLVSSIRNFMSGKGYLEVETPMMHVIPGGATARPFITHHNALDIDMYLRVAPE
LYLKRLVVGGFDRVFEINRNFRNEGLSPRHNPEFTMMEFYQAYSDYKDLMDLTEEMLSTV
ALDVLGSTSMPYGDETVEFGGKYARMSMFEAIKHYNPEHDAIQKLTEADLQDRDLMVSIA
KSVHVEVEEFWTCGQLLEEIFGETAEPKLIQPTFITGYPADISPLARRSDDNPFFTDRFE
FFIGGREVANGFSELNDAEDQDARFKAQVEAKDAGDDEAMYYDEDYITALEHGLPPTAGQ
GIGIDRLAMLFTNTHTIRDVILFPAMRPQQ
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgactgatgctgttcaaaatgaaacgcaactagaagcccattcacaagaagagaataag
ctgattgccgagcgtcgcgcgaaattggatgaaattcgcaagacttgcaacgctaacggt
caccctaacgacttccgtcgtgacagcttggctggcgaccttcagaaagagttcggtgaa
aagagtaaagaagaactggaagagctgaaccacgtagtggcgatcgcgggtcgtatcatg
gcgaagcgtggtccattccttgtgattcaggaaacttctggtcgtattcaggcttacgca
gcgaaagatgttcagaaagaactgaaagcaaaataccaagggttagacatcggtgacatc
atcggtgtgaaaggtgcgcttcacaagtcgggtaaaggtgacctttacgtgaacatggaa
gagtacgagttgctgaccaaagcactgcgtccacttccagagaagttccacggcttgacg
gatcaggaaatgcgttaccgtcaacgctatgttgacctgattgtgaacgaagattctcgt
caggcgttcatcatccgctctaagctggtgtcttctatccgtaacttcatgagtggcaaa
ggctacctggaagtggaaacaccaatgatgcacgtgattcctggcggtgcaacggctcgc
ccgttcatcactcaccacaatgcgctggacatcgatatgtacttgcgtgttgcgccagag
ctttatcttaagcgtttggttgtaggtggttttgaccgcgtattcgaaatcaaccgtaac
ttccgtaatgaaggtttgtctcctcgtcacaacccagaattcactatgatggagttctac
caagcgtactcagactacaaggatctaatggacctgactgaagagatgctaagtacggta
gcgctggatgttcttggttcaacgtctatgccttacggtgatgaaacggttgaattcggt
ggtaagtacgctcgcatgagcatgtttgaagccatcaaacactacaacccagagcacgac
gctattcagaaactgacagaagcggatctgcaagaccgcgacctaatggtgtcgattgcg
aaatctgttcacgtagaagtggaagagttctggacgtgtggtcaactgcttgaagagatt
ttcggtgagacagccgagcctaagctgattcagccaaccttcatcactggctacccagca
gacatttctccattggctcgccgtagcgacgacaacccgttcttcactgaccgttttgag
ttctttatcggtggtcgtgaagtcgcaaatggtttctctgagcttaacgatgctgaagat
caggacgctcgttttaaagctcaggttgaagcaaaagatgcgggtgatgatgaagcgatg
tactacgacgaagactacatcacagcacttgagcatggtctgccaccgacagcaggacag
ggaattggtatagaccgattggcaatgttattcacaaatacgcataccattcgtgatgta
attctattcccagcaatgcgaccacagcagtaa
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