Vibrio nigripulchritudo: VIBNI_A0780
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Entry
VIBNI_A0780 CDS
T02871
Symbol
mnmC
Name
(GenBank) tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein mnmC [Includes: tRNA (mnm(5)s(2)U34)-methyltransferase; FAD-dependent cmnm(5) s(2)U34 oxidoreductase]
KO
K15461
tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:
2.1.1.61
1.5.-.-]
Organism
vni
Vibrio nigripulchritudo
Brite
KEGG Orthology (KO) [BR:
vni00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vni03016
]
VIBNI_A0780 (mnmC)
Enzymes [BR:
vni01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.61 tRNA 5-(aminomethyl)-2-thiouridylate-methyltransferase
VIBNI_A0780 (mnmC)
Transfer RNA biogenesis [BR:
vni03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
VIBNI_A0780 (mnmC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltransf_30
DAO
Pyr_redox_2
Pyr_redox_3
Mqo
NAD_binding_8
GIDA
FAD_binding_3
FAD_binding_2
Pyr_redox
Motif
Other DBs
NCBI-ProteinID:
CCO56953
UniProt:
U4KDN4
LinkDB
All DBs
Position
1:complement(828921..830933)
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AA seq
670 aa
AA seq
DB search
MTSIKNAVLGWNEAGTPVSDQFDDVYFSNVNGLEETRYVFLTQNQLPQRWHNFEHRRFVV
AETGFGTGLNFLALWQWFDAFRKENPDSALKELHFISFEKFPVTRDDLKKAHESWSELAE
YASQLQAHYPIAVPDCHRIVLADGAITLDLWFGDIKDCMPSVPTPKEGLVDAWFLDGFAP
SKNPEMWNQDLFNGMAKLARQDCSCATFTAAGFVRRGLIEAGFSMKKVKGFGTKREMIAG
NLEEKAPITNLLPWLARQNTPNVSDIAIIGGGIASATLAQTLARRGIKTTLYCKDAIPAD
EASGNRQGAVYPLLNGTHTGMSRVFAPAFLFARQFAEQMSETVDFDHDWCGVTQLAWDEK
AAAKLDKMLLGHFSSDLIHKLDARETSEKTGMTFDMESVHYPLGGWLCPQQLTRGIIENL
ENQNRLSCHFQTEIDKLEKTETGWTLHSQSQKFEHQVVVVANGYLFNQFVQADTIPASAV
KGQVSHIPTTDSLKQLKTVLCYDGYMTPHNPANMEHCIGASYDRANIDKLFDESAQIDNA
EKLKRCVPNQAWSKEADTSGNQSRQGIRCVTRDHLPFVGAVGDYETILKEYADLQKQDEN
KVTETPIYQDLYCMIGLGSRGLSSAPLLAELLASQICGDPMPFPVETLNDLHPSRMWVRR
LRKGKAITER
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgacatccattaagaatgcagtccttggctggaatgaagccggaacgcctgtgtctgac
caattcgatgacgtctacttctctaacgtcaatggtctggaagaaacccgatacgttttc
cttactcaaaaccagcttcctcaacgctggcataactttgaacaccgacgctttgtggtt
gcagaaaccggattcggaaccgggctaaactttctcgcgctctggcagtggtttgatgct
tttagaaaagaaaacccagattccgcgttaaaagagctgcactttattagcttcgagaaa
ttcccagtcacacgtgatgaccttaaaaaagcgcatgaatcctggtcagaactggcagag
tatgcgagccagctacaagcgcactacccgattgcggtgccagactgccatcgcatcgta
ctggcggacggggcgataaccttggatttatggtttggcgacatcaaagactgtatgcct
agcgtaccaacgccaaaggaaggtttggtcgatgcttggtttttagatggatttgcaccc
agcaaaaacccagaaatgtggaatcaggatttgttcaatggcatggcaaaactcgccaga
caagattgcagctgtgccacttttactgctgcgggttttgtgcgtagaggtcttattgaa
gccggtttctctatgaaaaaggtgaagggttttggcaccaaacgcgagatgattgctggt
aacttggaagaaaaagcgcccatcactaaccttctaccttggctggctcgccagaatacg
cccaatgtatctgacattgccatcataggcggcggtatcgccagtgcgactctggcgcaa
accctcgcccgtcgtggtatcaaaacaacactttattgcaaagatgccattcctgctgat
gaagcatcagggaaccgacaaggggcagtgtatccgctccttaatggcactcacaccgga
atgtcgcgtgtgtttgctcctgcgtttctcttcgcccgtcagtttgcagaacaaatgagt
gaaactgtcgatttcgatcatgactggtgtggcgtcactcaactggcttgggatgagaaa
gcagccgctaaactcgacaaaatgttactcggtcacttttcgagcgatttgatccacaaa
ctggatgcgagagagactagcgaaaaaacgggcatgactttcgatatggagagtgtccat
tacccattagggggctggctatgcccacagcaactgacccgtggaatcatcgagaacctc
gagaaccaaaatcggcttagctgtcactttcagactgaaatagacaaattagaaaagacc
gagacaggatggacacttcattcacaaagccagaaattcgaacatcaggtggtggtcgtg
gcgaacggttatctgttcaatcagtttgttcaggcagacaccattccggcatcggcagtt
aaagggcaagtcagccatatccctactacagattcacttaaacagctcaaaactgtgctc
tgctacgacggttacatgacccctcacaaccctgcgaacatggaacactgtataggcgca
agttacgacagagctaacatcgataagttgtttgatgaatcagctcagatagacaatgct
gaaaaactcaagcgctgtgtgccgaatcaggcatggtcaaaagaagccgatacatctggt
aatcaatcccgacaggggattcgctgtgtcacccgagatcatctgccgtttgtcggtgcc
gtgggagattacgaaaccattttgaaagagtacgcggatctacaaaagcaagacgaaaat
aaggtaacggaaaccccgatatatcaggatttgtattgcatgattggcttaggctctcga
ggcctgagttctgcaccacttcttgctgaattactggcctctcaaatctgtggcgacccc
atgccattcccggtcgaaacattaaatgacctgcacccatcgagaatgtgggtcagaaga
ctgcgtaaaggcaaagccattaccgagcgataa
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