Vibrio nigripulchritudo: VIBNI_A0789
Help
Entry
VIBNI_A0789 CDS
T02871
Name
(GenBank) putative ABC-type sugar transport system, periplasmic component
KO
K10439
ribose transport system substrate-binding protein
Organism
vni
Vibrio nigripulchritudo
Pathway
vni02010
ABC transporters
vni02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
vni00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
VIBNI_A0789
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
VIBNI_A0789
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vni02000
]
VIBNI_A0789
Transporters [BR:
vni02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
VIBNI_A0789
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Peripla_BP_3
DUF917
UDPG_MGDP_dh_N
SBP_bac_3
Motif
Other DBs
NCBI-ProteinID:
CCO56960
UniProt:
U4JVR4
LinkDB
All DBs
Position
1:841114..842103
Genome browser
AA seq
329 aa
AA seq
DB search
MQFSKFKKINRFIFCFSALSVAISSPLAYADGEVGVLMKTLSNPFWGAMGQGVEDAAKSS
GTPYFIQAVESDQAAESQLNVCNTMLQRKPSALITAAINSTNLLPCLSKAQERGIPVVDL
DGNLDPDILKRAKIDIAFQIGSDNIAAGQQAAQYLTEQLGSGAKGAVLVIEGLSGNITGQ
KRVNGFTDKLKSIAPGLKVVASLPGDWDRGKAASITNDILIRHPDLVGIFAANDGMALGA
VESVYAAGKGGQVTVIGVDGNSDAVKSIQSGRLNASIAQLPYLVGKQAVERVKKIMNGES
TESVIHVPTLVLTKEVMESGKEPLLEFVK
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgcaattcagtaaattcaaaaaaataaaccgatttattttttgtttttcagcactttcg
gtagccattagctcacccttagcttatgcagatggggaagttggcgtactgatgaaaacg
ctttctaacccattctggggagccatgggacaaggggtagaggatgcggcaaaatcatcc
ggcacgccttacttcattcaggctgttgaaagtgatcaggcggcggaatctcagctcaac
gtgtgtaataccatgttgcaaagaaaacccagtgctttgatcactgcggcaattaactcc
accaacttattgccatgcctttctaaagcgcaggagcgcggtattccggtggtcgatctg
gacggtaacttagacccagacatcctcaagcgagccaaaatcgatatcgcattccagata
ggttccgacaacatcgctgccggtcagcaagctgctcagtacctgacagagcaactgggt
tcgggtgcgaaaggtgcggtactcgtcattgaagggctgtcaggcaacattactggtcaa
aaacgcgtgaatggcttcaccgataaactgaagtcgattgctccagggttgaaagtggtt
gcgagcctgccgggtgactgggaccgtggtaaagcggcatcgatcaccaatgacattctg
attcgtcatccagacttagtcggtatttttgctgcaaacgacggaatggcattaggtgct
gtggagtctgtttacgcagccggaaaaggcggtcaggtgacggttattggtgtagatggt
aactcggatgcggtgaaatcaatccagtctggtcgcctgaatgcgtcgattgctcagtta
ccttatctggttggcaagcaggcagtggaacgcgtgaagaaaatcatgaatggtgaatct
acagaaagtgttatccacgtcccaacgcttgtattgacgaaagaagtcatggagagcggt
aaggaaccacttttagaatttgttaaatag
DBGET
integrated database retrieval system
