Vibrio nigripulchritudo: VIBNI_A0803
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Entry
VIBNI_A0803 CDS
T02871
Symbol
truA
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
vni
Vibrio nigripulchritudo
Brite
KEGG Orthology (KO) [BR:
vni00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vni03016
]
VIBNI_A0803 (truA)
Enzymes [BR:
vni01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
VIBNI_A0803 (truA)
Transfer RNA biogenesis [BR:
vni03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
VIBNI_A0803 (truA)
Prokaryotic type
VIBNI_A0803 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-ProteinID:
CCO56974
UniProt:
U4K2U3
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All DBs
Position
1:861110..861901
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AA seq
263 aa
AA seq
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MRIALGIEYDGAKYFGWQRQREVASVQEKLEKSLSIVANHPVEVQCAGRTDAGVHGTGQV
VHFETTAVRKMVAWTMGVNANMPKDIAVRWAKEVPDEFHARFSATARRYRYVIYNHAYRP
GILSSGISHYHGDLDEKKMHLAGQYLLGENDFTSFRAVQCQSRSPWRNIMHLNVSRHGNY
VVIDIKANAFVHHMVRNITGSLIEVGRGNQEPEWIKWLLEAKDRRLAGATAKAEGLYLVD
VDYPEEFELPREPIGPIFLPDNL
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atgcgaattgcgttaggcatcgaatacgacggtgctaaatactttggttggcaacgccaa
agagaagtagccagtgttcaggaaaaactcgaaaaatctctgtctattgtggcaaaccat
cctgttgaagtgcagtgcgcaggcagaacagatgcaggcgtgcatggaacaggtcaagtc
gttcactttgaaacaaccgcagtaagaaaaatggtggcatggaccatgggggttaacgcc
aacatgcctaaagacattgctgtacgctgggcaaaagaggtgccggatgaatttcatgcc
cggttctcagctaccgcaagacgctatcgttatgtgatctacaaccacgcctatcggcca
ggaattttatcctcgggcatcagccattatcatggcgacttagacgaaaagaaaatgcat
ttagccgggcagtatctgctgggtgaaaatgactttacgtcttttcgggcggttcagtgc
cagtcccgaagcccgtggcgaaatatcatgcatttaaatgtgagtagacacggcaattac
gttgtcatagacattaaagcgaatgcgttcgtccatcatatggtgagaaacatcactggc
agcctgatcgaggttgggcgcggcaaccaagaaccagaatggatcaaatggttgctggaa
gctaaggacagaaggcttgccggggcaacagcaaaagcggaagggctctacttagttgat
gtagattaccccgaagagtttgagttgcccagggaaccgattggaccgatatttctgcca
gataacctctaa
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