Vibrio nigripulchritudo: VIBNI_A1134
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Entry
VIBNI_A1134 CDS
T02871
Name
(GenBank) putative Ribose ABC transport system, periplasmic ribose-binding protein RbsB
KO
K10439
ribose transport system substrate-binding protein
Organism
vni
Vibrio nigripulchritudo
Pathway
vni02010
ABC transporters
vni02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
vni00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
VIBNI_A1134
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
VIBNI_A1134
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vni02000
]
VIBNI_A1134
Transporters [BR:
vni02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
VIBNI_A1134
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Peripla_BP_3
Toprim_2
DUF5612
NYN
Motif
Other DBs
NCBI-ProteinID:
CCO57282
UniProt:
U4KAK4
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All DBs
Position
1:1225116..1226036
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AA seq
306 aa
AA seq
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MYKSVLCFVLLLFLVSGRASASSDYSIGVSVSDLTNPFFVTMVKSIKAEATQIPDKKIDV
IVRSSAYDLDRQNQQIDLFIERKVDLILLVASDEQGIAPAVNKARRAGIRVIAVDVRATG
ADVTITTDNIQAGEMACLKLVRKLNEKGRVIIINGPPVSASLDRVAGCKSVLNDYPDINL
LDADINGTGSYNGGLEAMAYALQAYSDIDGVFAINDPTALGAEQAMLQSGEQVWIASVDG
APSAIQALEEKRPNWLGTSAQFPKRMSREAVQIGLGLLNGGKVERELVLIKPEFIDVSNY
HQFSRW
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgtacaaatctgtgttgtgttttgtcttactgcttttcctggttagcggtcgcgcatct
gcgagttccgattattcaatcggagtgtctgtgtctgacctgaccaatccgttttttgtc
actatggtgaaaagcattaaggcggaagccacccagatacctgataaaaagatcgatgtg
attgtccgctccagtgcgtacgacttagatcgtcagaaccagcagatcgacctgtttatt
gagcgcaaggtggatttgatattgctggtggcatctgatgagcagggaatcgctccggca
gtgaataaagcgagaagggctggcatccgagtgattgcagttgatgtaagggcaacgggt
gccgatgtcactattactaccgacaacattcaggctggagaaatggcgtgcctaaaatta
gtgaggaagctgaatgaaaagggcagggtgatcatcattaacggtccacccgtgtcagcc
agtctcgacagagtggcggggtgtaagtcggtgctaaatgactacccagacatcaattta
ctggacgcagacatcaatggaacgggcagctataacggcggcttggaagccatggcatac
gcgcttcaggcttacagcgacatcgatggcgttttcgcgattaatgacccgacggctttg
ggcgctgaacaggcgatgcttcagtccggtgagcaagtctggatcgcttcggtcgatggt
gcgccttccgctattcaggctttggaggaaaagcgccctaactggttgggtacatcagcg
caatttcctaagcgaatgagtagggaagcagtacaaattggcttgggtctgctgaatggc
ggaaaagttgaaagagagctggtattgattaagcctgaattcatcgacgtatccaattac
catcagttttcgcgctggtag
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