Vibrio nigripulchritudo: VIBNI_A1470
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Entry
VIBNI_A1470 CDS
T02871
Name
(GenBank) putative Sensor protein
Organism
vni
Vibrio nigripulchritudo
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_9
HATPase_c
Response_reg
PAS_3
PAS
HisKA
PAS_4
PAS_8
Hpt
HAMP
dCache_1
PAS_13
HATPase_c_3
Diguanyl_cycl_sensor
DUF4211
Motif
Other DBs
NCBI-ProteinID:
CCO57597
UniProt:
U4KB91
LinkDB
All DBs
Position
1:1572195..1576673
Genome browser
AA seq
1492 aa
AA seq
DB search
MFGVLYYITWNATHELENKVQDEMQNSAKEIIEKIDRNLFERFHDARAFAMNARLPENFS
NANDAVKDRYLDYLDKLITEYKVYSHILLFSADGELVAQNRIDVLGEGVKPVVTSPERVL
LKQWFNDVLNEAYLRPLAPNPAYPELGTAVYGPVQSLFGQENVRQEQFDMMFATAIKDDA
GKVTGVWVNVLDFRFLEDIVHEYYMSLLMDGYEEVRILLTDPKDVVLIDMLHLESQITGF
FRENSELRGSQIKIGDTSINAVTREKFSGISILNDQNGVEQLQVYADSLGAYDFPGLNWK
VIIQMPTELAFVEAEQLKIKLWLISIMIIAALIVTGLYMFYRVSSPLKQLAVIFAQLSRN
EFSTPLPKYRESDEVGDIIKAVDIFKSRLQDREKLLEKTLDQQQELDLQRRAIMAAKSGM
MVCDALDKELPIVYVNHAFTTMTGYEKEEVIGKNPRFLHGPDHQQPGLIELRTALGEGQS
CNVYLQNQRKDSSIFHCHLHVDPVYSDEGALTHFIGVQTDVTELHKAKEEAQEANRQLED
LITQTTMELEDTESRMKAVFKSAVDCLIIFKLDETILDINDSTRELFGWTREELLGKPFD
VLLADDFGQKDINFLTHSIGLESTDKGGETDEVIGQTKDKQLLPLEMSITQVAANGEAYY
LGTLRDISDRKHAESELKLSKRNLQDLVHRLNLATEAGEIGIWTWDFKTGRLQWDDRMYL
MYDLKKTKEGATYETWRARVHEEDLEFAEIALIEAKNSLSRYYSEFRIQLPNGEVRWIKA
AADVVFDEGTRNAIGMGGVNIDITKEKTAQELLRRESELANAANEAKSMFLANMSHEIRT
PMNGVVGMINLLSDTDLTPEQSTMATTIRDSSMTLLNIINDILDFSKIEAGQMQVENIPV
EFQVVMERTADVLFLQAQKKYISLLLKHDSRIPKFIMSDGVRLGQILLNVVGNAVKFTSG
DEQYQGQVWIMTELLESADGDMIEIRVKDNGIGMSDAQMNKLFSAFSQADTSTTRVYGGT
GLGLSITKSLIEMMGGSIRVESQVGEGSCFTMTIPCVYDMDESVQQDNIDFSAVKILSVV
RSPELSEVVKHNLESVGCDVVSVSSFDRAEKVLTHDSQDFTILVAGPEHSVKDIEDTYEK
SVGLLLKEETKTLLLSDDTSSGKGFATSRTLVSGAHPLKPSELELGIAILLGKRSPIAEK
RQTLQTTQNLPSKEKARNDGRLILVAEDQPTNRDVLERQLNRLGYVCVMAEDGLAAYNMW
MREKFGLVLTDCHMPVMDGFELTKAIRKHEEEMEIPKPIPVIAITANALVGASEECIQAG
MDDYLSKPVELTALGDMLEKWLGVPEEELQQVANLPNAAPQVDQPLNEVTEIEDQSDALE
NVINFERLEAILGTAEIEFLAPLLQGYWDSLQNDMSALESALTEKNGQEVQSIAHAAKGA
ANSAGAETLAESFLTLQNEALKQDWSYLENVYQQSVVKVTDIQKYLEQEKII
NT seq
4479 nt
NT seq
+upstream
nt +downstream
nt
ttgtttggtgttctctattacattacgtggaatgcaacacacgagcttgaaaacaaagtt
caggacgaaatgcagaattctgcaaaagagatcatcgaaaaaatcgatcggaatctcttt
gagcgctttcacgatgcccgtgcatttgccatgaatgcacgattaccagaaaacttttct
aacgctaatgatgcagtaaaagaccgctacctagattacctcgacaaactgatcaccgaa
tacaaagtctattctcacatattattgttctcagcagatggcgagttggttgcccaaaac
agaatcgatgtccttggcgaaggagttaagcccgttgtgacatcgccagagcgagtgttg
ctaaagcaatggtttaacgatgtattgaatgaagcgtatctccgtcctcttgctccgaat
ccagcctatccagaattaggaaccgcagtctacggacctgtccagtcgctgtttggtcag
gagaatgtgcgacaggaacaattcgacatgatgtttgcgacagcaatcaaagatgatgca
ggcaaggttacgggcgtttgggtgaatgtacttgattttcgtttcttggaagacatcgtc
catgaatactacatgtcgctacttatggatggttatgaggaagtcagaatacttctgact
gacccgaaagacgtggtacttatcgatatgctccatctggaatcccagattaccgggttc
tttcgtgaaaattctgaactccgcggttctcagatcaaaattggggatacctcgattaac
gccgtaacaagagaaaagttctctggcatctccattctgaacgatcaaaatggagttgag
caattgcaagtctacgctgacagtttaggagcgtacgactttcccggcttgaactggaaa
gtcattattcagatgcctacggaattggcatttgttgaagccgagcagctgaaaataaaa
ctctggcttatttccatcatgatcattgcggcgctaattgtgactgggctttatatgttc
taccgagtcagttctccgttaaaacagctcgcggtgatatttgctcaactatctcgaaat
gagttttccaccccgttacccaaataccgtgaaagtgatgaagtgggtgacatcatcaaa
gccgtcgatattttcaaaagccggcttcaggacagagaaaagctgctggaaaaaacactc
gatcagcagcaggaactcgacctgcaaaggcgcgccattatggcggctaagtctggaatg
atggtttgtgacgcgctggataaagaattacccattgtttacgtcaatcatgccttcact
acgatgaccggttacgaaaaagaggaagtgatcgggaaaaacccaaggttcctgcacggt
cccgatcatcagcaacctggcttgattgaattaagaacagcgctaggcgaagggcagtct
tgtaacgtttatcttcagaaccagcgcaaggacagctcgattttccattgtcatttgcat
gtggacccggtgtattcggacgaaggggcactgacgcattttattggtgtgcaaaccgat
gtcactgagcttcacaaagcaaaagaagaggctcaggaagccaaccgacaacttgaagat
ttgattactcaaaccaccatggagcttgaagacacagagagccgaatgaaagcggtgttt
aagtcggctgtggattgtctcatcatctttaagctggacgagacgattctcgatatcaac
gactcaacccgtgagctatttggctggactcgagaggagttgctaggtaaaccctttgac
gtgctgttggctgacgactttggtcagaaagacatcaacttcttaacgcattcgattggc
ttagaatcaaccgacaaaggcggagagacagacgaagtcatcgggcaaactaaggataaa
caacttttacctttagagatgtctattactcaggttgcggccaatggtgaggcctattat
ttaggaacgctcagggacatcagcgatcgcaaacacgcggagtctgagctcaaactcagc
aagcgcaacctacaggatctggtgcatcgattaaatctggcaacagaagcaggtgaaatc
ggtatctggacatgggatttcaaaaccggaaggttgcaatgggatgatcgcatgtatctc
atgtatgacctgaagaagactaaagaaggcgcgacctatgaaacctggcgtgcccgagtt
catgaagaggatctggaatttgctgaaattgcgttaatcgaggccaaaaactcgctttcg
cgctattactcagaatttagaattcagcttcccaatggcgaagttcgctggattaaagcc
gctgctgatgtggtttttgatgaagggacacgtaacgccattggaatgggtggtgtcaat
attgatattaccaaagagaaaacagcgcaggagctgttacgtcgggaaagcgaactggcg
aacgccgctaacgaagcgaaatccatgttccttgcaaacatgagtcacgaaatccgaacg
cctatgaatggtgtggttgggatgatcaacctgctcagtgatacggatctgacgccagaa
caaagcaccatggcgacaaccatccgtgactcatcaatgacgctgcttaacatcatcaac
gacattctggatttctccaaaattgaagcgggtcagatgcaggtcgaaaacattcctgtg
gaattccaggttgtgatggaacgtactgcggacgtgctcttccttcaggcacagaaaaaa
tacatttcccttctccttaaacatgattcaaggattcctaagttcatcatgagtgatggg
gtaaggctgggtcagatcttactgaatgttgtgggtaatgcggtgaaattcaccagtggt
gacgagcaatatcaggggcaggtctggataatgactgaactgctcgaaagtgccgatggt
gacatgattgaaattcgggtgaaagacaacggcatcggtatgtctgatgcacaaatgaac
aagcttttctcggcattctcacaggcggatacatccacaacacgggtatatggcggaact
ggattagggctgtcgataacgaaatctcttatcgaaatgatgggaggaagcattcgtgtg
gaaagtcaggtaggcgagggcagttgcttcactatgacaataccctgtgtctacgacatg
gatgaaagcgttcagcaagacaatattgatttttccgcagtgaagattttgtcggtagtc
cgttcccctgaactgagtgaggttgtgaaacataacctagagagtgtcggatgtgatgtg
gtatcggtatcttcgtttgaccgagccgagaaagtgctcacccacgactctcaagacttc
acgatattagtcgcaggtcctgagcatagcgtgaaagacatagaagatacttatgaaaaa
agcgtaggtcttctgcttaaagaagagactaaaacgctgctattgtcagatgacacatca
tcaggcaaaggatttgctacctccagaaccctagtatcgggtgctcacccgctgaaacct
agcgagctggaactgggtatcgccatcttattgggtaaacgcagcccaattgcagagaaa
aggcaaacgctgcaaaccactcaaaatctcccttctaaagagaaagcaagaaatgacggg
cgcttgattctggttgctgaagatcagccaacaaaccgtgatgtactggaaaggcagctt
aatcgtcttggttatgtgtgtgtaatggcggaggacggactcgccgcctacaacatgtgg
atgcgagagaagtttggcttggttctgacggactgccatatgccagtaatggatggtttt
gagctgacaaaagccattagaaagcacgaagaagaaatggagataccgaaaccaattcca
gtcatagcgattaccgccaatgcgctggtgggggcaagtgaagagtgcattcaggcagga
atggatgattacctttccaaacccgtagagctcacggcattgggtgacatgctggaaaaa
tggctgggtgtgcctgaagaggagttgcaacaagtcgctaatctaccaaatgcagctccg
caagttgatcagccacttaatgaagtgactgagatcgaagaccagtctgatgcattggaa
aacgtaattaatttcgagcgactagaggcgattttagggacagcggaaatcgagtttctt
gcgcctttacttcaggggtactgggattcactccagaacgatatgtctgccctggaaagt
gcactgacggaaaagaatggccaggaagtgcagagtattgcccacgcagcaaaaggtgca
gcgaattcagcaggggcagaaacgctggcggaatcgtttctcactttgcaaaacgaagcg
ctcaaacaggactggagctatttggaaaatgtgtaccagcaaagtgttgttaaagtcacc
gacatacaaaaatacttagaacaagaaaagataatttaa
DBGET
integrated database retrieval system
