Vibrio nigripulchritudo: VIBNI_A1885
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Entry
VIBNI_A1885 CDS
T02871
Name
(GenBank) putative Polyketide synthase (Fatty acid synthase/beta-ketoacyl synthase)
Organism
vni
Vibrio nigripulchritudo
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
Condensation
ketoacyl-synt
Ketoacyl-synt_C
KR
PP-binding
Thioesterase
AMP-binding_C
adh_short
Epimerase
KAsynt_C_assoc
adh_short_C2
3Beta_HSD
NAD_binding_10
Thiolase_N
ACP_SdgA_C
GDP_Man_Dehyd
Polysacc_synt_2
NAD-bd_HRPKS_sdrA
Abhydrolase_6
NmrA
Glu_dehyd_C
Motif
Other DBs
NCBI-ProteinID:
CCO57982
UniProt:
U4KC53
LinkDB
All DBs
Position
1:complement(1996416..2005175)
Genome browser
AA seq
2919 aa
AA seq
DB search
MIELFEEIVASHPDHLAIEDGERALTYVQLDRLSDVLAAHFDGLGIKSGDRLGVCLPRSI
ELVATLLAAVKMGVCYVPIEPSTPQMRREELYQQCGIETVVAESTTLSKWVRESDKEETV
ALSPIEQGFTEWLSNIETLEAPVLFRPNANSNDLACLFFTSGSTGVPKGVSVLCTGIQSV
VHQPNYVPIELGSRVGCLANPTFDALTFEVWGALLNGATIVVVNQESLVNPALLASKLKH
SQIDVAFMTTGLFNLMAMEDPQALASIQHLLVGGEAFVPANAAYFFDADQTKKARLYNAY
GPTECTTFSACHPILPERLPEYIESGRVPIGKGINQTQIHIVVDRNRFAQPSEIGEIAIT
GPALAKGYFGDQQKTEARFLFLPWLNEKAYLSGDLGRINELGEIEFLGREDQQVKVRGHR
IELTEIEQVLQSHSSVLHASCVPVKGQETDIYAYLVLESDASKESLRTHLKQHLPAYMLP
HRYFAITNPPLNKNGKLDRRQLRKMENREITDSDNRVISARAELLRQAPVSGEYFMSLTK
EVLHLTSEPNLDESFVECGGDSLKAMRLVARLRDKWDCSLSVGDVMSSESLLSVAKQIEQ
QALIPQEAGAEWAGEKQDGSRYLASPEQARLALLQYLNPSSVAYNAPYHFEIQGELDVDA
FKKAWEFTVRHHGALRSAFLQSDGQIEVVERDYEDSLFGCQWLGNQTHKLDNVAKAVFDI
ENDALCRAAIAQSTNKNTYYLVLCFHHLVIDGWSVNVLLKALSEAYHSAIKNRSLAENEN
EDPFESRLTPVSYASFSVKRQQYHQSSSAKVARAFWQQQSQQYPPTLFGENTPLCQPNNT
DGTCEIILDDGLWHAAKLCAKQQGISLYSLLLSAFSLTLSRYFQQDRVSVASPVANREGG
DFESLVGMCANTCLFQVDMPSGLSVDKYLALVNQVVVQTQKHQEIDFGEVAALHLDRNQD
IIEAMLVLENTDTQALNLDGLALNAKTLFSGEAKFPLTLFVTDLDEKAECILEFQGSKLN
LELVSQFARSFSAVLNNLATQPNSAIHLLPAFNQEQMTQHMGWSEYSQAESLTWKRLDEW
FDYQASVTPDALAVELGEARLTYYELHEQSNRIAQALAEYVEPDGSSIVGVSFHRSPEVL
IAILGILKTGAAYLPLDPDYPSERLERMIEMSGVALTIGGTHSVLQHHYSFKTIAQLLQG
FDGLNAPDKFLNLAEMKTDRAYVLYTSGSTGTPKGVDVSHRSLLNYLSHCTHHYYSDAER
GVVSSSINFDATITTLLAPLVAGKTVSLIEQDGNEIQSILNALTSSEPAVFKLTPTHLKA
LSFYLDSGKPLLSNHTLVVGGEAFDASTAKRIANSLPNARIINEYGPTEATVGCTTYSYC
YKDTFHSESNLASVPIGKPISGTAIYVLNPYAQPCPVGVQGEIYVGGNGLANGYLNQPDT
TLERFVRVNVFGKTQRLYKTGDLGYWNEQGELIYCGRNDEQVKLNGYRIELGEIENALAN
VLTNVACAVVLKSNSEGMETLIAYCQMSSERLAENKMRCIELLSQQLPDFMVPKLFVAIS
ALPETPNGKLDRDALPVPKEWFTAIKEVSNQSEIVSSVGQRLHTIFNELLGHTIDPDSHF
FEAGFNSLSLMKAHSHIIKDDQLSQLTPPIKLVDLFAHSSIRKLTEYVENSTPVSASHIQ
NSPSQTSDIAVIGMAVNLPNADNLEAFWRVIQSGEECIQRIEQPDDNTDPSWVYVRSSME
GVDTFDAGYFGISEHDAKLMDPQQRHALMSAVHALEDSGIQWGNANPLGVVMSASDNTYG
SKILRNSNGKLDDYALSLLNEKDFISTRIAYHLNLTGPAITSQTACSSSLVAIHQACRQI
QTQECDIALAGGVNADLDTLEGYAYREGMILSKDGHCKPFSKHAGGTVPANGIGMVVLKR
LDLAQQDGDRIYAVIKGSAVNNDGKDKVSFYAPSVKGQADVIVQAQKNAGVTSEQINYIE
AHGTGTKLGDPIEIEALSQAFERNRSDDVQSPECLIGSTKSQMGHLGSAAGVTGFIRTVL
ALYREELPKSTWNDEPNPDIDFSRAGLALTKNSYEWNGNNRLAGVSSFGMGGTNAHVVLG
SYDAGEPLFARSLPLTQFDKKPYLSDFYHRSVTAEPSERAKFEDWFREECWQRATKVSQK
ETDLPTLVYNSELTHCSHLSEVFHANTVEVTSIEAFRASLEALSANHTRVNVMYCVDEKN
PLGHGVELIQACLSAPHNMEVSLVCLLKGVADVTGDEALIPENSTVIGLANTVSIEQPNL
SLACLDVTDSASTSQLSAGIATLFERMKKQTEESAEHVNLYALRGHYLWKPTFQPYHFEN
EPYRFENKAVAMPDSGVYIITGGTGGIGQHLCEYLSNLNENNAVISVSRSASDSSLSTQL
GIQTVQCDVSDSEQWHTLIDSVATTFGKVTGIVHAAGSAGGAMLHSATASNIESSQNAKT
AGAQNIVNSARQYHPEFVMFCSSMSSVYPVAGQTDYCAANTFLNQLAVSENQSGTVRYIS
LNFPTWAKTGMAKAVKDTAFAITPDEGVRVFERAIERGEGVIYISPLKPKFAQAFFHRLN
SKPERTSNIEQSDCANSNVREQLTRIFSEVLGMDESDTEADVCFYDLGGDSLTVLDLFDE
LNATFPNQFTLAELNHNISINCLAEKLECGAQSDSLAPDDGEIDVVIHPVGGKVSGYRYW
LENYPKNRTVLTLRDPLLGDEREFLSTIESLAEHYHNTLKSKKVSRVIGWSFGAVIALEM
AKNLDPAVELVLIDPPALDDQRETDQQELNRVFVSEIIQQYPELEGQLNSQSSVSDIVKA
LSQQGHVQASEQTQQYLEQVVSTCQKNAAALATYRSTHKVSNPTCLFYASEHEEEEQQRM
LASWQIRLLSMTSQAVNGDHYSILNNEGSKAMIGALPNN
NT seq
8760 nt
NT seq
+upstream
nt +downstream
nt
atgattgagttgtttgaagagatagtcgcttctcaccctgatcaccttgccattgaagac
ggtgagagagcgttaacttatgttcaactggacaggttaagtgatgtattagccgctcat
tttgatggtttaggtatcaaatcgggcgatcgccttggggtttgtttaccccgttccatc
gaattggtggcaacattgttggctgcggtgaaaatgggtgtgtgctacgtgcccatcgag
ccaagcacgcctcaaatgcggcgcgaggagttgtaccagcaatgcggtatcgaaactgtg
gtggctgaatcaacgactctctccaagtgggtgcgagagtctgacaaggaagaaacagtc
gctctaagccctatcgagcaaggttttactgagtggctaagtaatatagagacacttgaa
gcgcccgtcctatttcgtcctaatgccaatagcaacgacttggcgtgcctgttttttacc
tcgggttcaactggagttcccaaaggggtgtcggttctgtgtactggaattcaaagcgtt
gtgcatcagccgaactacgtgccgattgaactgggcagccgagtagggtgcttggccaac
cctacgtttgatgcattaacctttgaagtttggggagcattgcttaatggcgcgactatt
gtcgttgtgaatcaagaatctttggttaacccggctctgcttgccagcaagttaaaacat
tctcaaattgacgttgcctttatgacgacgggtctgttcaatttgatggcgatggaagac
ccgcaggcgctggcgtccattcaacatttattggtggggggagaggcattcgttcccgcc
aacgcagcgtatttttttgatgctgaccaaaccaaaaaagcgcgcttatacaacgcatac
ggtccaacagagtgcaccacgttcagtgcgtgtcatccgatattgcctgagcggttacct
gaatacattgaatccggtcgcgtacccattggcaaaggcattaaccaaacgcagattcac
atcgtggttgatcgaaatcgttttgcacaacccagtgaaattggggagattgcgattacc
ggtcccgctttggcaaaagggtactttggagaccagcaaaagaccgaagcacgtttccta
tttcttccctggctgaacgaaaaagcgtatctgagcggtgacttgggacgaattaacgag
cttggtgagatcgaatttctagggcgggaagatcaacaagtcaaagttcgggggcatcga
attgaactgactgaaattgaacaagtccttcagtcacattccagcgtattgcacgcatcc
tgtgtgcctgtaaaaggtcaggaaaccgacatctacgcctatctggtgttagaaagtgac
gccagtaaggagtcgctgagaacccacttaaagcagcatttgcctgcgtacatgttgccg
caccgatattttgcgattaccaatcctccattgaacaaaaatggcaagctcgatcgacgc
cagcttcgcaaaatggaaaaccgagaaatcaccgactcagacaaccgtgtgataagcgcg
agggcagagttacttcggcaagcccccgtgtctggcgagtactttatgtcgctgaccaaa
gaggttctgcatcttacaagcgaaccgaatttggatgaaagctttgttgaatgtggtggc
gattcgctgaaagccatgcgcctagtggctaggctgcgtgacaagtgggattgttcactt
agcgtgggcgatgtcatgtcgagcgaatcattgttgtctgtagcgaaacagatcgaacag
caagctttgatacctcaagaagccggcgcagaatgggcgggagaaaagcaagacggttct
cgctatttggcttcccctgagcaggctcgcttggcgcttttgcaatatttgaatccaagt
tcggtggcgtacaacgcgccatatcactttgaaatccaaggcgagttggatgttgatgca
ttcaaaaaagcgtgggagttcaccgtgagacaccacggtgcgctgagaagtgcctttctt
cagagcgacggtcaaattgaagtagttgaacgcgactacgaagattctctgttcgggtgc
caatggctgggaaatcaaacccataagttggacaatgtcgccaaagcggtattcgatatt
gaaaacgacgctttgtgtcgggcagccattgcccaatccaccaataaaaatacctactac
ttggtgctgtgttttcatcacttggtgattgatggctggagtgtcaacgtactgcttaag
gcgttaagcgaagcgtaccattcagctattaagaatcgctctttggcagaaaatgagaac
gaggatccgtttgaatcaaggttgactcccgtttcttacgcatcgttcagcgttaagcgt
caacagtaccaccaaagcagttccgcaaaggtggcgcgagcattctggcaacagcagagc
caacaatatccacccacattgtttggtgaaaacacgcctctttgccaacccaataatacg
gatggcacatgtgagatcattttggatgatggcttatggcatgccgcaaagctttgtgcc
aaacaacaaggcatctctttatacagccttcttctgtcggcgttcagcctgactttaagc
cgttactttcagcaagatcgtgtgtccgttgcctctccagtcgctaaccgtgagggggga
gatttcgaatcgctggtgggcatgtgtgccaacacctgtttgttccaggtggatatgcct
tcggggttgagtgtcgacaagtatctggctttggtgaatcaagtggtggtgcaaacccag
aaacaccaagagatagactttggtgaagtggctgctcttcaccttgatcgaaaccaggac
atcatcgaagccatgttggtgttagaaaacaccgacactcaagcactgaatctggatgga
ttggcgcttaatgcaaaaacgctgttttctggtgaagccaagttcccgctcactcttttc
gtgactgacttggatgaaaaagccgaatgcatactggaatttcaaggaagtaagctgaat
ctagaactggtgagccagtttgcgcgctcgttttctgctgtgttgaacaatcttgccacg
cagccgaactctgcgattcatttattgcccgcattcaatcaagaacagatgacacagcac
atggggtggagtgaatattcacaagctgagagcctgacttggaagcggcttgatgaatgg
tttgactatcaggcatcggttactcctgatgctctggcggttgaactcggtgaagcaagg
cttacctactacgaactgcacgaacagagcaatcgaattgcgcaagcgttagcagaatat
gttgagccagacggcagcagtattgttggggtaagttttcatcgtagtcccgaggtgttg
attgcgatactcggaattttgaaaacaggtgcagcgtacctgcctcttgatcctgattac
ccaagtgaacggttggagagaatgatcgagatgtctggggtggcgctcacgatcggaggc
acgcattctgtacttcaacaccattactcattcaaaaccatcgcgcagctacttcagggt
ttcgatgggctgaacgcgcctgataaattcctgaatctcgcggaaatgaagacggacaga
gcctacgtgctttatacgtcaggctcgacgggtacgcccaagggtgtcgatgtatcacac
cgttcgctgctcaactatctttcgcattgcacccatcattattacagcgacgctgagcga
ggggtggtgtcttcatcaatcaactttgacgctacgattaccaccttattagcaccgctt
gtcgcaggcaaaacggtttcgttgatagagcaagacggcaatgaaatccaatctattctc
aatgcgctgacaagttcagagccagcggtgttcaagctaacgccgacccatttgaaagcc
ttgagtttttacttggattcaggaaaaccgcttttgtccaatcacacgctggtcgttggt
ggagaagcgttcgatgcgtcaaccgcaaaacgtattgcgaattcgctgcccaatgcacga
atcattaatgaatacgggccaaccgaagccacagtggggtgcactacgtactcttattgc
tacaaagacacgttccattccgagtctaacctagcttcagtgcctattggcaagccgatc
agcggcacggcaatctatgtgctaaatccatacgctcaaccttgtcctgtcggtgttcaa
ggagaaatctatgtaggcggaaacgggttagcgaatgggtatttgaatcagccagatacc
actctagaacgtttcgtccgagtgaacgtgtttgggaaaactcaaaggctctacaaaacc
ggcgatcttggctattggaatgagcagggcgaactgatttactgtggtcgaaacgacgag
caagttaagctcaacggctatcggatcgagttgggtgagatagaaaacgccttagccaat
gtactgaccaacgtagcgtgcgcggtggtgttgaaatccaactcagaaggaatggaaaca
ctcatcgcttattgtcagatgagttctgaacgattggcagaaaacaaaatgcgctgcatc
gagctcttatctcagcaactgccggactttatggtgccgaaactatttgttgccatcagt
gcattaccagaaacgcccaatggtaagctggatcgtgatgcgcttcctgtccccaaggag
tggtttacggcaatcaaagaggtgagcaatcaaagtgagatagtttcgtcggttgggcaa
cgactgcacaccattttcaatgagctgcttggtcacacaatcgacccggacagccacttt
tttgaagcaggttttaactctttatctttgatgaaagcgcacagccatatcatcaaagat
gaccaactcagccaattgacgccgccgataaagctggtggatctgtttgcccattccagt
attcgcaaacttaccgaatatgtcgaaaattctacgccagtatcagcatcacatattcaa
aattctccgtctcaaaccagtgatatagcggttatcggcatggcggtgaacttacctaat
gccgacaatctagaggcgttttggcgtgtgattcaaagtggtgaagagtgcattcagcgc
attgaacaaccggatgataataccgatccatcatgggtttacgttcgttcaagcatggaa
ggtgtcgatacgttcgatgcgggatattttggtatttcagagcacgacgccaaattgatg
gatccacagcaacggcatgcgctgatgagcgccgttcatgctttggaagactcgggtatt
caatggggcaacgccaaccctctcggtgtggtgatgagcgccagcgataacacctatggc
agcaaaattttaagaaacagcaatggaaagctggatgactacgctttatctctgctgaat
gagaaggactttatctcaactcgaatcgcttaccatctcaacctgacgggacctgcgatc
acctctcaaacagcctgttccagttccctagtcgctattcaccaagcgtgtcgtcaaatt
caaactcaggagtgtgatattgcgttagcaggtggggtaaatgcagatttggatacgctg
gaaggctacgcgtatcgagaggggatgatcctatcgaaagacggtcactgcaaaccattt
tcgaaacacgctggcggcacagtgcctgcgaatggtatcggcatggtggtactgaaacgg
ctggatctagcccagcaagacggtgaccgtatttatgcggtaatcaaaggcagtgcagtc
aataacgatggcaaggataaagtcagcttttatgctccttccgtaaaagggcaggcagat
gtcatcgttcaagcgcaaaaaaatgcgggtgtcacaagcgagcagataaactacatcgaa
gcacacggcacaggcaccaaactgggcgacccaatagaaattgaagcgctaagccaagcg
tttgaacgaaatcgaagtgatgatgtgcaaagccccgagtgcttaataggttcgacaaaa
agccagatgggacaccttggcagtgcggcaggtgtgacaggttttatccgcactgtgctt
gctctttatcgagaggagttgccaaagagtacttggaatgacgaaccaaacccagacatc
gatttttcccgagcaggtcttgcactgaccaaaaacagctacgaatggaatggcaacaac
cgattagccggtgtcagtagctttggtatgggaggaacgaatgctcatgtggttctcgga
tcttatgacgcaggggagcctctttttgcgcggagcctaccgcttacgcaattcgataaa
aagccctatctgagtgatttctatcatcgttccgtgacggcagaacccagtgaacgcgca
aagtttgaagactggttcagagaggagtgctggcaaagagcgacgaaggtgtcacagaaa
gaaacggatctgccgacattggtttacaactcagaactcactcattgctctcatctttca
gaggtgttccacgccaacaccgttgaggtgaccagcattgaagcgtttagagcgtctctg
gaagcattgagcgccaatcatacccgtgtgaatgtgatgtattgtgtcgatgagaaaaat
cctctcgggcacggtgtggaacttattcaggcttgtctatctgcaccacataatatggaa
gtctctctggtttgcctgcttaaaggcgttgctgatgtgacaggcgatgaagccctgata
ccagagaacagtacagttattgggttggcgaatacggtgtcaatcgagcagcccaatctg
tcattggcgtgcttggatgtaaccgattcggcgtctacttcccagctttcagcagggatt
gctaccttatttgaacgaatgaaaaagcaaactgaagagagtgcagagcacgtaaacctt
tatgctttaagagggcactacctttggaagcctacgtttcagccatatcactttgaaaat
gaaccctatcgctttgaaaataaagcagtggcgatgcctgactcaggtgtgtacatcata
actgggggaacaggtgggatagggcaacatctttgcgagtacctaagcaaccttaatgaa
aataacgcggtgatctctgtgtcacgcagcgcaagcgattcttcactttcaactcaacta
ggcattcagactgtccaatgcgacgtcagtgattccgaacagtggcatacgcttatcgat
tctgtcgcaaccacatttggcaaggtgacgggcattgttcatgccgcgggttctgctggg
ggcgctatgttgcattccgctaccgcaagcaacatagaatcgagccagaacgccaaaaca
gcgggtgcgcaaaacattgttaattcagcgcgccaatatcatcctgaatttgtgatgttc
tgttcgtccatgtcttcggtttatccagtggcagggcaaacggattactgcgcggcgaac
acgtttttaaaccaacttgccgtgtccgagaatcagtctggaaccgttcgatatatttct
ctgaacttcccaacatgggcaaagacgggaatggcgaaagcagtaaaagacacggcattt
gccatcacaccagatgagggcgttagggtatttgagcgagcgattgaaaggggtgagggg
gtaatttacatttctccattgaaaccaaaattcgcacaggcgtttttccatcgtttgaat
agcaaacctgaacggacttcaaatattgagcaatctgactgtgcgaactctaatgtgcgc
gaacaactcacccgcatcttttcagaggtgctggggatggacgaaagcgacacagaagct
gacgtgtgtttttatgatttgggaggagactcactaacggttcttgacctgtttgatgag
cttaatgcgacatttcccaaccaatttactctggcagaactgaaccacaatatctcgatt
aattgtcttgctgagaagttagagtgtggagctcagtctgacagtctggcgccagatgat
ggcgaaattgacgttgtgattcaccccgttggcggtaaagtttctggctatcgatactgg
ttagaaaattatccgaaaaatcgaacggtgttaactcttcgggatccacttttaggtgac
gaacgcgagtttctatctacgattgaatccttagctgagcattaccataacactttgaag
agtaagaaagttagcagagttattggttggtcatttggtgctgttattgcactggaaatg
gcgaaaaacctcgatcctgctgttgaactggttttgattgatcctcctgctttggatgac
caaagggagaccgaccagcaagaactcaatcgggtatttgtcagtgaaatcatccagcaa
tatcctgaacttgaagggcagcttaattctcaaagctcagtgtcagatatcgtgaaagcc
ttgtcccaacaagggcatgttcaagccagtgaacagactcaacaatatcttgagcaagta
gtgtctacttgccaaaagaatgcggctgcgctggcaacttatcgctccacacacaaagtc
agtaatcctacatgcctattttatgcctctgaacatgaagaagaggagcaacaaagaatg
ctggcttcatggcaaatacgtcttttgagcatgaccagccaggctgtaaatggagatcat
tattcgattctcaataatgaagggagtaaagccatgataggagctttgccaaacaactag
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integrated database retrieval system