KEGG   Vibrio nigripulchritudo: VIBNI_A2012
Entry
VIBNI_A2012       CDS       T02871                                 
Name
(GenBank) putative DNA polymerase III subunit epsilon
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
vni  Vibrio nigripulchritudo
Pathway
vni03030  DNA replication
vni03430  Mismatch repair
vni03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:vni00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    VIBNI_A2012
   03430 Mismatch repair
    VIBNI_A2012
   03440 Homologous recombination
    VIBNI_A2012
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:vni03032]
    VIBNI_A2012
   03400 DNA repair and recombination proteins [BR:vni03400]
    VIBNI_A2012
Enzymes [BR:vni01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     VIBNI_A2012
DNA replication proteins [BR:vni03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     VIBNI_A2012
DNA repair and recombination proteins [BR:vni03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     VIBNI_A2012
SSDB
Motif
Pfam: RNase_T Rv2179c-like RNase_H_2
Other DBs
NCBI-ProteinID: CCO58101
UniProt: U4K661
LinkDB
Position
1:2140614..2141339
AA seq 241 aa
MSLFRNSRLGGQTDWQSRFKEKAQSVTDERLHDFYQAGIVSGDTPLSKVPFVALDFETTG
LDAEKDDIVSIGLVPFNLNRIYCNQARHWIVRPNTPLQEESVVIHGITHNDILDAPDLRR
VLDEVLDALAGKVVVVHYRKIEREFLDTALKDRIEEGIVFPVMDTMEIESYVQDMNTKGI
FNRLKGNKRQPVRLGSSRERYGLPVYPPHHALTDAMATAELLQAQIQHHFSPDTPIEKVW
L
NT seq 726 nt   +upstreamnt  +downstreamnt
atgagtttattcagaaatagccgtttaggcgggcaaacggactggcaaagccgctttaag
gagaaagcccaatctgtcaccgatgagcgcctgcacgacttctatcaggctggtattgtg
tcaggtgatactcctctgtctaaagtgccgtttgtcgccctggattttgaaacgacgggc
ttagacgctgaaaaagacgacatcgtcagtattggtctggttccttttaaccttaaccgg
atttactgcaatcaggccagacactggatcgttcgccccaacacaccgcttcaggaagag
tccgtggtgattcacggtatcactcataatgacattctggatgcacccgatttaagaaga
gtattagatgaagtactggatgccttggctgggaaggtcgtggttgtgcactacagaaaa
atcgaacgagaatttttggatacggcgttaaaagaccggattgaagagggcatcgtgttt
ccggtcatggataccatggaaattgaatcctatgtgcaggatatgaataccaagggtatt
ttcaaccgccttaaaggcaacaaacgtcagccagtgcggttaggttcttctcgcgagcgt
tacggactgcctgtttacccgcctcaccatgcactaacggacgccatggcaacagcagag
ctgcttcaggctcagattcagcatcatttctctcctgatacccctatcgaaaaagtctgg
ctataa

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