Vibrio nigripulchritudo: VIBNI_A2050
Help
Entry
VIBNI_A2050 CDS
T02871
Symbol
gyrA
Name
(GenBank) DNA gyrase (type II topoisomerase), subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
vni
Vibrio nigripulchritudo
Brite
KEGG Orthology (KO) [BR:
vni00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vni03032
]
VIBNI_A2050 (gyrA)
03400 DNA repair and recombination proteins [BR:
vni03400
]
VIBNI_A2050 (gyrA)
Enzymes [BR:
vni01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
VIBNI_A2050 (gyrA)
DNA replication proteins [BR:
vni03032
]
Prokaryotic type
DNA Topoisomerases
VIBNI_A2050 (gyrA)
DNA repair and recombination proteins [BR:
vni03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
VIBNI_A2050 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
DUF6674
ApbA
Motif
Other DBs
NCBI-ProteinID:
CCO58138
UniProt:
U4KFT9
LinkDB
All DBs
Position
1:complement(2188463..2191078)
Genome browser
AA seq
871 aa
AA seq
DB search
MSDLAKEITPVNIEDELRGSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWN
KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM
RYTEVRMAKIAHELLADLDKETVDYVPNYDGTEQIPAVLPTKIPNLLVNGASGIAVGMAT
NIPPHNLTEVIEGCLAYINNEEITIDELMDYIPGPDFPTAALISGRKGIVDAYKTGRGKI
YMRSKAEIEADKNGKETIVVTEIPYQVNKARLIEKVAELVKDKKVEGISALRDESDKDGM
RIVIECKRDAVGEVVLNNLYAQTQLQTTFGINMVALNNGQPQLFNLKDMLKCFVDHRREV
VTRRTIYELRKARDRAHILEGLALALANIDEIIELIRNAPTPAEAKAGLVARGWDLGNVA
AMLERAGTDAARPDWLEEQYGIRDGQYFLTEQQAQAILDLRLHKLTGLEHEKILDEYKAL
LEEIAELMHILASTERLMEVIREELEAVRDGFGDARRTEITAAVHDIDMEELIAQEDVVV
TLSHEGYVKYQILSDYEAQRRGGKGKSATKMKDEDYIERLLVANTHDNILCFSTRGKTYR
LKVYQLPQASRNARGKPIVNILPLEEGERITAILPVSEYSADKYIFMATGDGTVKKTSLD
QFANVRSNGLIAVNLRDDDSLIGVDITDGDSDIMLFSKEGKVVRFSEDKVRAMGRTAAGV
RGMKLAENDQVVSLIVPSNEGDILTVTQNGYGKRTPLAEYPTKGRATQGVVSIKVSERNG
CVVGAVQTEENDEFMMITDAGTLVRTRVSEVSQVGRNTQGVTLIRTAEDENVVGLQRIDE
VEESDLPEGEEAESAENSAEQPAAQQDDSQE
NT seq
2616 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatctagctaaagagatcacgcccgtaaatattgaagatgagcttcgaggttca
tacctagactacgcgatgtccgtaatcgtgggtcgtgctcttcctgatgtgcgtgatggc
ctaaaaccagtacaccgccgcgtattgttcgcgatgaatgtactaggcaatgattggaac
aaaccatataaaaaatccgcccgtgtggttggtgatgtaatcggtaaataccatccacat
ggtgatagtgctgtatacgacacaattgtgcgtatggcacagcctttttcgcttcgctac
atgttggtcgatggccaaggtaactttggctcgatagacggtgactctgctgcggcaatg
cgttacaccgaagttcgtatggcaaaaattgcccacgagcttttggctgatctcgacaaa
gaaacagtggattacgtacctaactacgatggtactgagcaaatccctgcggtactgcca
acaaaaattcctaacctactggtgaatggtgcctctggtatcgcggtaggtatggcaaca
aatatcccaccccacaacctgaccgaagtgatcgaaggttgtctggcgtacatcaataat
gaagaaatcactattgatgaactgatggattacattccaggtcctgacttcccaacggca
gctctaatcagtggtcgtaagggcatcgttgatgcttataagacaggtcgcggtaagatc
tacatgcgttctaaagcagagatcgaagccgacaagaatggtaaagaaaccatcgtcgtt
actgaaatcccatatcaggtcaacaaagctcgtttgatcgagaaagtcgctgaactggtt
aaagataagaaagtagaaggcatcagtgcactgcgcgatgagtctgataaagacggtatg
cgcattgttattgaatgtaagcgtgatgcagtcggcgaagtggttctgaataacctttac
gctcaaacgcaactgcagactactttcggtatcaacatggttgcgctgaacaatggtcag
cctcaactgtttaacctgaaagacatgctgaagtgcttcgtcgatcaccgccgtgaggtt
gtgacacgtcgtactatttacgaattgcgtaaagctcgcgaccgtgcccacatcctggaa
ggtttggctcttgcactggcgaacatcgatgaaatcatcgaattgatccgtaatgcgcca
acgcctgccgaagcgaaagctggtcttgtggctcgtggctgggatctaggcaatgtagcg
gcaatgcttgaacgtgctggtactgacgccgctcgtccagactggttagaagagcaatac
ggcattcgtgacggtcagtacttcctgactgagcagcaagcacaggctattctggatctg
cgtctacataagttgaccggtctggaacacgaaaagattcttgatgagtacaaagcactt
ctagaagaaatcgctgagttgatgcacattctggcaagcacagagcgcttgatggaagtg
attcgtgaagaacttgaagcagtacgtgacggtttcggcgatgctcgccgcacagaaatc
acagcagcggttcacgacatcgacatggaagagctgattgctcaagaagatgtggttgtg
actctgtcacacgaaggttacgtgaagtaccaaatcctaagcgattacgaggcacagcgt
cgtggtggtaaaggtaagagcgcaacgaagatgaaagatgaagattacatcgaacgtctg
ctggttgcgaacactcacgataacattctatgtttctctacccgtggtaagacgtaccgc
ctgaaagtgtatcaattacctcaagcgagccgaaatgctcgtggtaagccaattgtgaac
attcttccattggaggaaggtgaacgtattacggctatcctgccagtatctgagtactct
gctgataagtacatctttatggcaacgggcgacggtacagttaagaagacgtctctggat
caattcgctaacgttcgttcaaacggtctgattgctgtgaaccttcgtgatgacgactct
ttgattggcgtcgatattactgatggtgacagcgacatcatgctgttctcgaaagaaggt
aaagtcgtacgcttctctgaagataaagttcgtgcaatgggtcgtaccgcagcaggtgtt
cgtggtatgaaactcgctgagaatgaccaggtagtgtccttgatcgtcccatctaacgaa
ggtgacatcttgacagttacgcaaaatggttacggtaaacgtacaccactagcagaatac
ccaacgaaaggtcgtgcaactcagggcgttgtttctattaaggtttctgagcgtaacggc
tgcgtagttggtgcggttcagactgaagaaaacgacgagttcatgatgatcaccgacgca
ggtaccttagttcgtactcgtgtatctgaagtgagccaggttggacgtaacacgcaaggt
gtaacgctaatcagaacggcagaagacgagaacgttgttggtttgcaacgcattgatgaa
gttgaggaatctgatttgccggaaggtgaagaagctgaatcagcagaaaacagtgcagag
caacccgctgctcagcaggatgactcacaagagtaa
DBGET
integrated database retrieval system
