Vibrio nigripulchritudo: VIBNI_A2333
Help
Entry
VIBNI_A2333 CDS
T02871
Symbol
ihfB
Name
(GenBank) Integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
vni
Vibrio nigripulchritudo
Brite
KEGG Orthology (KO) [BR:
vni00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vni03032
]
VIBNI_A2333 (ihfB)
03036 Chromosome and associated proteins [BR:
vni03036
]
VIBNI_A2333 (ihfB)
03400 DNA repair and recombination proteins [BR:
vni03400
]
VIBNI_A2333 (ihfB)
DNA replication proteins [BR:
vni03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
VIBNI_A2333 (ihfB)
Chromosome and associated proteins [BR:
vni03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
VIBNI_A2333 (ihfB)
DNA repair and recombination proteins [BR:
vni03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
VIBNI_A2333 (ihfB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-CCDC81_euk_1
DUF4777
HU-DNA_bdg
Glycos_trans_3N
HU-CCDC81_bac_1
Motif
Other DBs
NCBI-ProteinID:
CCO58404
UniProt:
U4K6X4
LinkDB
All DBs
Position
1:complement(2483648..2483932)
Genome browser
AA seq
94 aa
AA seq
DB search
MTKSELIERLCAQQTHLSAKEVEDAVKDILEHMASTLESGDRIEIRGFGSFSLHYREPRM
GRNPKTGEKVELDGKYVPHFKPGKELRERVNIHG
NT seq
285 nt
NT seq
+upstream
nt +downstream
nt
atgactaagtctgaactaatagaaagactctgcgcgcagcaaacacacctttctgcaaaa
gaagtagaagatgccgtcaaggatattcttgaacatatggcgtcaaccctggaaagcggt
gatcgtattgagatccgtggtttcggtagtttctcattgcactatcgtgagccaagaatg
ggtcgtaacccaaaaactggtgaaaaagttgagctagacggcaagtacgtacctcacttc
aagccgggtaaggagttacgcgaacgcgttaacatccacggctaa
DBGET
integrated database retrieval system
