Vibrio nigripulchritudo: VIBNI_A2355
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Entry
VIBNI_A2355 CDS
T02871
Name
(GenBank) putative DNA polymerase III subunit delta
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
vni
Vibrio nigripulchritudo
Pathway
vni03030
DNA replication
vni03430
Mismatch repair
vni03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vni00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
VIBNI_A2355
03430 Mismatch repair
VIBNI_A2355
03440 Homologous recombination
VIBNI_A2355
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vni03032
]
VIBNI_A2355
03400 DNA repair and recombination proteins [BR:
vni03400
]
VIBNI_A2355
Enzymes [BR:
vni01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
VIBNI_A2355
DNA replication proteins [BR:
vni03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
VIBNI_A2355
DNA repair and recombination proteins [BR:
vni03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
VIBNI_A2355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNApol3-delta_C
HolB_lid
Motif
Other DBs
NCBI-ProteinID:
CCO58425
UniProt:
U4JZK4
LinkDB
All DBs
Position
1:complement(2506463..2507422)
Genome browser
AA seq
319 aa
AA seq
DB search
MDVLYPWLQTTWEHWQALLRNDRVTGALLCHAHSGLGAEQLASKFGEALVCVNSDDDACG
FCHSCDLSKSGSHPDIHQISPEKEGKTISVDQIRQANRWALESSQLGGKRLIVIAPAEAM
NESASNALLKTLESPAENCVFLLLTGDKHQLLPTIVSRCQQWDIVQPDHQQAMSWLNQNS
DKPISELALKLTHGAPLSAQAFVESGLEKVFLEMNHVLMEQLSEPIPSFGQVWKSLKDAP
VERLGWLSILLTDIQKSHFVQNQEKQMEPLAKLVSYDLAYKKTRELNQLIHQLKTFPGLN
AELLTAEWFLDLHEKKNVC
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atggacgtgttatacccctggctacagacaacttgggaacactggcaagctttgctacgc
aatgatcgcgtaacaggtgctttgctttgtcatgcccattcaggtcttggtgcagagcag
ttagcgtcaaaatttggagaagcgttggtctgcgtaaactcagatgatgatgcgtgtggg
ttttgccatagttgcgatttatctaagtcaggcagccatcccgacatccatcagatttcc
cctgagaaagaaggcaaaaccatctcggttgaccagattcgacaggcaaaccgatgggcg
ctggagtcgtctcagctgggtggaaagcgcttaattgttatagcacctgctgaagccatg
aacgagtctgcctctaatgcgttgctaaaaacgctggagtctccagctgaaaactgtgtc
ttcctgttacttacgggtgataagcaccaattattgcctacaatagtgagccgctgtcag
caatgggatattgttcagccagaccatcagcaggcgatgagctggttaaaccaaaatagc
gataaaccaatcagtgaacttgcactgaagcttactcacggtgctccgctatcagcccag
gcatttgtagaaagtggtttggaaaaggtatttttagagatgaaccacgttctgatggag
cagctctctgaaccgataccttcattcggtcaagtctggaagagcttaaaagatgcgcct
gttgaacgtctgggctggctcagcattctcctgaccgatatccagaaaagtcacttcgtt
caaaatcaagaaaagcagatggagccactagccaaactggtgagctatgatcttgcttat
aaaaaaacacgagaattaaaccagcttattcaccagttaaaaacatttcccggcttaaac
gcggaattactgactgcagagtggtttttagatttacacgagaagaaaaatgtttgttga
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