Vibrio nigripulchritudo: VIBNI_A2396
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Entry
VIBNI_A2396 CDS
T02871
Name
(GenBank) putative GGDEF family protein
KO
K20955
diguanylate cyclase [EC:
2.7.7.65
]
Organism
vni
Vibrio nigripulchritudo
Pathway
vni05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vni00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
VIBNI_A2396
Enzymes [BR:
vni01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.65 diguanylate cyclase
VIBNI_A2396
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GGDEF
GGDEF_GdpP
OHCU_decarbox
Motif
Other DBs
NCBI-ProteinID:
CCO58463
UniProt:
U4KG80
LinkDB
All DBs
Position
1:complement(2548986..2550446)
Genome browser
AA seq
486 aa
AA seq
DB search
MMSSQHMSLRYVFLVPAIFAIGMLLMVAMNYFERTEKRVAHEYQRVEHAIHRSVKILTSL
DYTLSTHYQNENFPHFQHNSQVQNGVCRIWPIEALILAEDKNLNIPAVDISYMISGDDSM
CVRGSALNLHAVEMMDLAPMLSFLHDLDEHILGVHYVAEEGLVISSPDNLANNIERSSIE
HFKSLPFWYLTSQNSDSITVTGPIESPNDLDRVLTLSLPVSHGEDFKGVVSLEINTNLLL
TSNTSASQRLMLVQHENLADYQNRKYVYPLSIQGVAFEHVLFYQSDLMDELISLLNEERN
AVFIIAIIYILTVISLFYLNLNFERRYFQNLAERDPMTGLLNRRGLEIEFKKPCRFQFEG
IAVFDIDNFKKINDTYGHEMGDQVICFVADQMRSVLREMDVVSRFGGEEFVVYIRANSPQ
LIVEIAHRIHNQVARESTNILAEGFTLSGGVCVEDHHDHKGLKELVKSADKKLYHAKESG
KNQVTF
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcttcccaacacatgagtttaagatacgtatttcttgtccctgccatatttgcc
attggcatgttgctgatggtagcaatgaattacttcgagcgaaccgaaaagcgggtagct
cacgaatatcagcgtgttgaacacgccatccatcgttccgttaagatactgacctctctt
gattacacactttctactcattatcagaacgagaacttcccgcattttcagcacaattct
caggtgcaaaacggagtgtgtcgaatttggccgatcgaagctctaatacttgctgaagac
aaaaacctgaacattccagctgtagacatcagctatatgatttccggtgacgacagcatg
tgcgttcgaggttctgcgctgaaccttcatgccgttgaaatgatggatctcgcgcctatg
ttgtcttttctgcatgatctggatgagcacatacttggcgttcactatgtggcggaagag
gggctggttatctcatcgccagataatcttgcgaacaatattgaacgttcttcaatagag
cactttaaatctcttccgttctggtatctgacaagccaaaactcggattctattacggtg
accggaccaatagaaagcccgaacgatctagacagagtgctgaccttgtcgctacctgtt
agtcatggagaggattttaaaggtgtcgtctctcttgaaataaatactaatctgctgctg
acatccaatacgtctgccagccagcgtttgatgttggtacaacacgaaaatctcgctgat
taccaaaaccgcaaatacgtttacccactatccattcagggggtggcatttgagcacgtt
cttttttatcagtctgacttgatggatgaactgatctcattgcttaatgaagaacgtaac
gccgtctttattattgcgatcatatacatactcacggttatcagcttgttttaccttaac
ctcaattttgaaaggcgatacttccaaaacctcgcagagagagatccaatgacgggtctg
ctcaatcgacgcggattagagattgaatttaagaaaccgtgtcgattccagtttgaagga
atcgctgtgtttgatatcgataatttcaagaagatcaacgacacctatggtcacgagatg
ggcgatcaggtgatttgctttgtggctgaccaaatgcggagtgtgttacgtgaaatggat
gtggtttcacgctttggaggggaagagtttgttgtgtacatacgtgccaacagcccacag
ttgattgtcgaaattgcgcatcggatacacaatcaagtcgcgagagaatccaccaatata
ctggcagaagggtttacgctatcgggtggcgtgtgcgtggaagatcatcatgaccacaaa
gggttaaaagagctggtgaaatcagccgacaagaaactctaccatgctaaagaatctggc
aagaatcaggtcacgttttaa
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