Vibrio nigripulchritudo: VIBNI_A2414
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Entry
VIBNI_A2414 CDS
T02871
Symbol
menD
Name
(GenBank) 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase
KO
K02551
2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:
2.2.1.9
]
Organism
vni
Vibrio nigripulchritudo
Pathway
vni00130
Ubiquinone and other terpenoid-quinone biosynthesis
vni01100
Metabolic pathways
vni01110
Biosynthesis of secondary metabolites
vni01240
Biosynthesis of cofactors
Module
vni_M00116
Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol
Brite
KEGG Orthology (KO) [BR:
vni00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00130 Ubiquinone and other terpenoid-quinone biosynthesis
VIBNI_A2414 (menD)
Enzymes [BR:
vni01000
]
2. Transferases
2.2 Transferring aldehyde or ketonic groups
2.2.1 Transketolases and transaldolases
2.2.1.9 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase
VIBNI_A2414 (menD)
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Motif
Pfam:
TPP_enzyme_M_2
TPP_enzyme_N
TPP_enzyme_C
TPP_enzyme_M
Motif
Other DBs
NCBI-ProteinID:
CCO58480
UniProt:
U4JZQ3
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Position
1:complement(2567883..2569595)
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AA seq
570 aa
AA seq
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MIEQASLNRTWAKLILEELTRFGAEHICIAPGSRSTPLTLEADDHPNLNLHCHFDERGLG
FYALGIAKSTQKPVAIVVTSGTAVANLLPAVCEANLTGEKLVLLTADRPVELIDCGANQA
IEQVGIFSSHVVKALNLPSPNTRISPNWLLSSLDECLHLQAEQGGVIHINCPYPEPLYGG
EPVSSDSHYFNGVRAWFTHKKPFTTKHSQVVANSINPNDFATKKGVVILGSLSLEEAQNA
KKLGERLGWPIFCDPQSGVSSEYAHFDLWLRNEEAARVLQGCDFVLQFGGRLVSKRLLKW
LGDRSETCDYWMVQPYNQRLNPGLRAQNRIATHITQWCLEILDSLHPAEVRFPGWAESLK
DISQKTSELIQRSEHALCSETRLTIELFEEQTERTNLFLGNSLIVRLVDMLTSLPDTEVY
SNRGASGIDGLIATAAGIHAASGKKSLVMLGDTSLLHDINSLALWTHQEAQPSVIFVSNN
DGGAIFDFLPVPANKKRALYQMPHGFLFKHAAMQFGLSYTAPESTQTCIQEIQSHLNRGE
GTLLVELITPPEQTSQELKPIVDKVMHDLI
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgattgaacaagccagtttgaacagaacatgggctaagctgattttagaagagctaacc
cgatttggcgcagaacatatctgtatcgcgccgggatcccgctctacaccactgacgcta
gaagcggacgaccatccgaacttgaatttacattgtcattttgatgagcgcgggttgggc
ttttatgcattgggcatcgctaaatctactcaaaagcccgttgctatcgtcgtgacatca
gggactgcggttgccaatcttcttcctgcagtctgtgaagcgaatctaaccggagaaaaa
ctggtgttgcttacggcggatcgcccggttgagctaattgattgtggagcgaatcaggcg
atagaacaggtcgggatattctcatctcacgttgtaaaagctctcaaccttcctagcccc
aataccaggatttcacctaactggttactctccagtctggatgaatgcttgcacctacag
gcagagcagggtggtgtcatccatatcaactgcccatatccagaacctttgtacggtggt
gaacccgtatcttcagactcccactacttcaatggtgttcgggcatggtttacccataag
aagccatttacgactaaacacagtcaagttgtagcgaacagcatcaatcctaacgatttt
gcgactaagaaaggggtagtcatactgggttcgctgtcgttagaagaagctcagaatgcg
aaaaagctcggtgagcgcctaggctggccgatattttgcgaccctcaatccggagtgagc
agcgagtacgctcattttgatctctggctgagaaacgaagaagctgccagagttcttcag
ggctgtgattttgtcctccagttcggtggacgattggtgtccaagcgtttgttgaagtgg
ctaggtgaccgctcagaaacatgcgactactggatggtgcagccgtacaaccaacgactg
aatccggggttgagagcacagaaccgtattgcgactcatataacgcaatggtgtctagaa
atattggacagtctgcaccctgcggaagtccgatttccaggctgggcggaaagcctgaag
gacatctcgcagaaaacttcagagctgatacaacgaagtgaacacgcactatgctctgaa
accagactgaccattgagttgtttgaggagcaaacagaaaggaccaatctgtttttagga
aatagtctgattgtcaggttagtcgatatgctcacctcactcccagacacagaggtgtat
tccaatcgtggtgcctctggcattgacggattgattgcaacggcggcaggcatacatgct
gccagtggtaagaagtcgttagtaatgctaggagatacttcactgctgcatgacatcaac
tctttagcgctgtggactcatcaagaagcgcagccatcggtgatctttgtttccaacaat
gatggtggtgcaatattcgatttcctacccgttccggctaacaagaagcgtgcactttac
caaatgcctcatgggtttctgttcaaacatgctgctatgcaatttgggctgagttacaca
gcgcccgaaagcacacaaacctgcattcaggaaattcagagtcacttgaaccgaggtgaa
ggcacactgttagtcgagctgataacaccgccggagcaaacctctcaggagctcaagcct
attgtcgataaggtgatgcatgatcttatctag
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