Vibrio nigripulchritudo: VIBNI_A2557
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Entry
VIBNI_A2557 CDS
T02871
Name
(GenBank) putative Pyridoxal phosphate-dependent transferase
KO
K01580
glutamate decarboxylase [EC:
4.1.1.15
]
Organism
vni
Vibrio nigripulchritudo
Pathway
vni00250
Alanine, aspartate and glutamate metabolism
vni00410
beta-Alanine metabolism
vni00430
Taurine and hypotaurine metabolism
vni00650
Butanoate metabolism
vni01100
Metabolic pathways
vni01110
Biosynthesis of secondary metabolites
vni01120
Microbial metabolism in diverse environments
vni02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vni00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
VIBNI_A2557
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
VIBNI_A2557
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
VIBNI_A2557
00430 Taurine and hypotaurine metabolism
VIBNI_A2557
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
VIBNI_A2557
Enzymes [BR:
vni01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.15 glutamate decarboxylase
VIBNI_A2557
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Gene cluster
GFIT
Motif
Pfam:
Pyridoxal_deC
Beta_elim_lyase
Aminotran_5
SepSecS
DUF1836
Motif
Other DBs
NCBI-ProteinID:
CCO58615
UniProt:
U4K047
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Position
1:complement(2723095..2724723)
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AA seq
542 aa
AA seq
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MVYFTSNSQEISSETAARADRASKVEDFFNGKADLTALAAIEETLQHDYEYFLCKLSDVA
VSGQSTDFEVPESPLTTEAFCNFLQGLLTCIAPVFSPEFVGHMTSALPKHAIMMSKILAA
TNQNVVKVETSNQFTSLEKSIINYFHKLCYQSDYSESSIPSDLSLGNFCSGGTVANLSAL
WVARNRALGANVGEVGLLKALKGCPYDDLAIVVSESGHYSLKKAADLLGIGKENLIAVKT
DSHHKIDIADLRKTLSRLRDDNIGVLAIVGVAGATETGVIDPLNEMADLAREYQCHFHVD
AAWGGASLLSDQHRELFSGIEKADSVTIDAHKQLYVPMGAGMVLFKDPHAVQSISHHANY
IIRKGSDDLGAHTIEGSRGAVAAMVAANLALLGKKGMSQLIDNSIEKAKALATHIATLTD
FELTSEPTLCILTYRYAPDSLMSSLNLLDAESRYNALEMLDELNKEIQETQRDTGIGFVS
RTKIRVNKEEQKRVVFRVVLANPLTQMSHLTAILDEQIRIASQSEGLTKLNQYIQHSLKR
SA
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggtgtattttacttcaaattctcaagagatttcctctgagactgctgccagggctgat
cgagcttccaaagtcgaagacttctttaacggcaaagccgatttaacggcacttgcagcg
attgaagaaacactgcaacacgattacgaatacttcctctgcaaactgtctgacgtagca
gtttctggccaatcaacggattttgaggtgccagaatcccccctgactacagaagcattt
tgcaatttcctgcagggcctgctcacttgcattgcccctgttttttctcctgaattcgtc
ggacacatgacctctgctttacctaagcatgccatcatgatgtccaaaatcctggcggct
acaaatcagaatgtcgttaaggttgaaacatccaatcagttcacatcgcttgaaaaaagc
atcattaactatttccacaagctctgttatcaatcggattattctgagagttcaatccca
tcagatcttagcctgggaaacttttgctctggcggcacagtagccaatctttctgcactg
tgggttgcacgaaatcgagctttaggagccaatgtcggagaggtaggtttactcaaagcg
ctcaaaggttgcccttatgatgacctggctatcgtggtctcggaaagtggtcactattca
ctaaaaaaagccgcggatttactgggtatcggcaaagagaatctcattgcggtgaaaacc
gattctcaccacaagatagacattgctgaccttcgcaagacattgtccaggctgcgcgac
gacaacatcggagtacttgccattgtcggcgttgcgggagccactgaaacaggggttatt
gaccctctgaatgagatggctgacctagcgcgtgaataccagtgtcactttcatgtcgat
gccgcgtggggcggagcgagcttgctgtccgatcagcaccgtgaactgttttctgggatt
gaaaaagcggactccgtcactatcgacgctcacaagcagctttatgtcccaatgggagca
ggcatggtgctgttcaaagaccctcatgccgttcagtcaatttcgcatcatgctaactac
atcatcagaaaaggctctgatgatttaggtgcccacactatcgaagggtcgcgcggtgca
gtcgccgctatggtggcggcaaaccttgcgttgttgggtaaaaaagggatgtctcagctg
attgataacagtattgagaaagccaaagcactggcaacacatatagcgaccctgactgac
tttgagctgaccagtgagccgacactttgcattctcacctatcgatacgcccctgattca
ctcatgtcgtctctgaatctgctggatgcagaatcgcgttacaacgcgttggagatgcta
gacgagcttaataaagagatacaggaaacccagcgtgatactggtattggatttgtgtcc
cgtaccaagattcgagttaacaaagaagaacaaaagcgcgttgtgtttcgcgttgtactg
gcgaatcctctaactcaaatgtcccacctgactgccattctcgatgaacaaatccgcatc
gccagtcagagtgaaggtttaacgaaactcaaccagtacatccagcactcgttaaagcgt
tccgcataa
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