Vibrio nigripulchritudo: VIBNI_A2565
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Entry
VIBNI_A2565 CDS
T02871
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase, flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
vni
Vibrio nigripulchritudo
Pathway
vni00020
Citrate cycle (TCA cycle)
vni00190
Oxidative phosphorylation
vni00650
Butanoate metabolism
vni00720
Other carbon fixation pathways
vni01100
Metabolic pathways
vni01110
Biosynthesis of secondary metabolites
vni01120
Microbial metabolism in diverse environments
vni01200
Carbon metabolism
Module
vni_M00009
Citrate cycle (TCA cycle, Krebs cycle)
vni_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
vni_M00149
Succinate dehydrogenase, prokaryotes
vni_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
vni00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
VIBNI_A2565 (sdhA)
00650 Butanoate metabolism
VIBNI_A2565 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
VIBNI_A2565 (sdhA)
00720 Other carbon fixation pathways
VIBNI_A2565 (sdhA)
Enzymes [BR:
vni01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
VIBNI_A2565 (sdhA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
HI0933_like
DAO
GIDA
Pyr_redox_2
Thi4
FAD_binding_3
FAD_oxidored
Motif
Other DBs
NCBI-ProteinID:
CCO58623
UniProt:
U4KGE2
LinkDB
All DBs
Position
1:complement(2735034..2736800)
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AA seq
588 aa
AA seq
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MTIPVREFDAVVIGAGGAGMRAALQISEQGLSCALLSKVFPTRSHTVSAQGGITVALGNS
HKDNWQWHMYDTVKGSDYIGDQNAIEYMCKTGPESVIELEKMGLPFSRFENGSIYQRPFG
GQSKEFGGEQAARTAAAADRTGHALLHTLYQQNIKHKTTIFSEWYALDLVKNQDGAILGC
TAICMETGEMCYFKSKATVLATGGAGRIYASTTNAHINTGDGVGMALRAGVPMQDMEMWQ
FHPTGIAGAGVLVTEGCRGEGGYLLNKDGERFMERYAPNAKDLAGRDVVARSMMIEIREG
RGCDGPWGPHIKLKMDHLGQEVLESRLPGICELSRTFAHVDPVKEPIPVIPTCHYMMGGV
PTQVSGQALKQNADGTDVEVQGLFACGEIASVSVHGANRLGGNSLLDLVVFGRATGLHLG
ETLEAQAEARPATDSDIEASLARTMRWENSTGGEDPAQIRKDLQRCMQNSFSVFREGEAM
ATGLEELKVIRERLKDAHLADKSTEFNTERIECLELDNLMETAFSTAVAANYRTESRGAH
ARFDFPDRDDENWLCHSIYNPDSEAMTKRDVNMTPVHREAFPPKARTY
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
gtgactattccagttcgtgaattcgatgccgttgtaatcggcgcaggtggcgcgggcatg
cgcgctgctctacaaatttctgagcaggggctgtcttgtgctctgctttctaaagtattt
cctactcgctcacatactgtttcagctcaaggtggtattacggtagcacttggcaactcc
cataaagataactggcagtggcacatgtacgacaccgttaaaggctctgattacatcggt
gaccagaatgcgatcgagtacatgtgtaagactggtcctgaatctgttatcgagcttgaa
aaaatgggcttaccattttctcgctttgaaaacggcagcatctaccagcgtccgtttggt
ggacagtctaaagagtttggtggtgagcaggcggcacgtactgctgcggcagctgaccgt
accgggcacgcactgcttcacacgctttatcagcaaaatatcaaacacaaaaccaccatc
ttctctgagtggtacgcccttgatttagtgaaaaaccaagatggtgcaattcttggctgt
acagcaatctgtatggaaacgggcgaaatgtgctacttcaagtcgaaagcgactgtgctt
gcgactggtggtgccggccgaatctacgcatcgacaacgaacgctcacatcaacacgggt
gatggcgttggtatggcattgcgcgctggtgttccaatgcaagacatggaaatgtggcag
ttccacccgactggtatcgcaggcgcgggtgtgctggtaaccgaaggttgtcgtggtgaa
ggtggttaccttctcaataaagacggcgagcgctttatggagcgttatgctcctaacgcg
aaggaccttgcgggtcgtgacgttgttgctcgttctatgatgatcgaaatccgtgaaggt
cgtggttgtgatggtccatgggggccacacatcaaactgaagatggatcaccttggtcaa
gaagttctggaatctcgtctaccgggtatttgtgagctttctcgtacctttgctcacgtc
gatcctgtgaaagaaccaattccagttatcccaacctgtcactacatgatgggtggtgtt
ccgactcaggtatctggtcaagcgcttaaacaaaatgccgacggcactgatgttgaagtc
caaggtttgtttgcttgtggcgaaatcgcatctgtatcggtacacggtgctaaccgtctg
ggtggtaactcactactcgacttagtggtattcggacgtgcaacaggtcttcaccttggt
gaaactctggaagcacaagccgaagcgcgcccagcaacagattctgacatcgaagcatct
ctggctcgtactatgcgttgggaaaacagcaccggcggtgaagatcctgctcaaatccgt
aaagacctgcaaagatgcatgcaaaacagcttctcggtattccgtgaaggtgaagcaatg
gcaacagggcttgaagagcttaaagttattcgtgagcgcctgaaggatgctcacctggct
gacaagtcaacagaattcaacacagagcgaatcgagtgtcttgaactggacaacctgatg
gaaaccgcattctcgacagcggtagctgcaaactatcgtacggagagtcgtggtgctcat
gctcgttttgatttcccagaccgtgatgatgaaaactggctatgccactctatctacaat
ccggattctgaagcaatgactaagcgtgatgtgaacatgacaccagttcatcgtgaagca
tttccgccgaaagcacgtacatactaa
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