Vibrio nigripulchritudo: VIBNI_A2676
Help
Entry
VIBNI_A2676 CDS
T02871
Symbol
kdsA
Name
(GenBank) 2-dehydro-3-deoxyphosphooctonate aldolase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
vni
Vibrio nigripulchritudo
Pathway
vni00541
Biosynthesis of various nucleotide sugars
vni01100
Metabolic pathways
vni01250
Biosynthesis of nucleotide sugars
Module
vni_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
vni00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
VIBNI_A2676 (kdsA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
vni01005
]
VIBNI_A2676 (kdsA)
Enzymes [BR:
vni01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
VIBNI_A2676 (kdsA)
Lipopolysaccharide biosynthesis proteins [BR:
vni01005
]
Lipid A
VIBNI_A2676 (kdsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
Motif
Other DBs
NCBI-ProteinID:
CCO58727
UniProt:
U4KDW4
LinkDB
All DBs
Position
1:complement(2841878..2842729)
Genome browser
AA seq
283 aa
AA seq
DB search
MEHKTVRIGDLEVANDKPFTLFAGMNVLESRDLAMQICEHYVEVTQKLGIPYVFKASFDK
ANRSSINSYRGPGMEEGMKIFQELKDTFGVKIITDIHTEEQAQPVSEVVDVIQLPAFLAR
QTDLVHAMAKTSAVINVKKPQFMSPGQVGNIVDKFEECGNDQIILCERGSCHGYDNLVVD
MLGFGVMKKASKGSPIIFDVTHALQMRDPSGAASGGRREQTVELAKAGLATGIAGLFIEA
HPNPEKALCDGPSALPLDKLEPFLAQMKALDDLIKGFEHIQID
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atggaacataaaaccgtcagaattggcgatcttgaggtcgctaacgataagccgtttaca
ctttttgcgggcatgaatgtcctcgaatctcgcgatctagcgatgcaaatctgtgaacat
tacgtggaagtgactcagaaactgggcattccttacgtattcaaagcatcttttgataaa
gccaaccgttcttccatcaattcgtaccgtggtccgggtatggaagaaggcatgaagatt
ttccaggaactgaaagacacttttggcgtgaaaatcatcacggatattcatactgaagag
caggcgcaacctgtatcagaagtggtggacgtgattcagcttccggctttcttggctcgt
cagacagatctggttcacgctatggcgaaaacgagtgccgtgatcaacgtgaagaaacct
caattcatgagtccggggcaggtaggcaacatcgtcgacaagtttgaagaatgcggtaac
gatcagatcattttgtgtgagcgtggttcttgccatggttatgacaacctggtcgtggac
atgctgggctttggtgttatgaaaaaggcgtcgaaaggcagcccaatcatcttcgacgtg
actcatgcattgcaaatgcgtgatccatctggcgcggcttctggtggtcgtcgtgagcaa
accgttgagctggcaaaagcgggtttggcgacaggcattgcaggtttgtttattgaggcg
catccgaacccagaaaaagcattgtgtgatggtccatcagcattgccactagacaagctg
gaacctttcctagcgcaaatgaaagcgttggatgacctgattaaaggtttcgagcacatt
caaatcgattaa
DBGET
integrated database retrieval system
