Vibrio nigripulchritudo: VIBNI_A2710
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Entry
VIBNI_A2710 CDS
T02871
Symbol
holA
Name
(GenBank) DNA polymerase III, delta subunit
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
vni
Vibrio nigripulchritudo
Pathway
vni03030
DNA replication
vni03430
Mismatch repair
vni03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vni00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
VIBNI_A2710 (holA)
03430 Mismatch repair
VIBNI_A2710 (holA)
03440 Homologous recombination
VIBNI_A2710 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vni03032
]
VIBNI_A2710 (holA)
03400 DNA repair and recombination proteins [BR:
vni03400
]
VIBNI_A2710 (holA)
Enzymes [BR:
vni01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
VIBNI_A2710 (holA)
DNA replication proteins [BR:
vni03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
VIBNI_A2710 (holA)
DNA repair and recombination proteins [BR:
vni03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
VIBNI_A2710 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delt_C
DNA_pol3_delta
DNA_pol3_delta_C
Shikimate_DH
Motif
Other DBs
NCBI-ProteinID:
CCO58758
UniProt:
U4KGL0
LinkDB
All DBs
Position
1:2877073..2878095
Genome browser
AA seq
340 aa
AA seq
DB search
MRLFADKLADHLPRAQHGIYLIFGNEPLLLQESREAIQAHAKTQGFEERHRFAMDAQLDW
NLVFDCCQALSLFSARQIIELEVPETGVNAAAGKELINLSEMLHPDILLVLIGHKLTKQQ
ENAKWFKTLAANACVVNCLTPDTQRLPQFVQQRCRKLNLMPDTQAVQLLAQWHEGNLLAL
SQSLEKLTLLYPDGQLTLPRVEEALSRHNHFTPFQWMDALLAGKGKRAQRILRQLEAEGT
EAIILLRTVQKELLLLLEMQKECATQPVGRVFDTRRVWQNKRPLYSAALQRLQAQDINKL
LSLTAQTERDAKTSYDKPVWLSMAQISLQFCEPKAAFGTA
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgcgtttatttgccgacaaacttgccgatcatctaccacgcgctcaacatggtatctat
ctgatattcggtaacgaaccactgcttcttcaggaaagtcgagaagcaattcaggcacac
gcgaaaactcaggggtttgaagagcgacaccgctttgctatggatgctcagttggattgg
aatctggtcttcgactgctgtcaggcattgagcctgttctcggcaaggcaaatcatcgaa
ttggaagtaccagaaactggcgtaaatgccgcagctggcaaagagctgatcaacctttct
gagatgttacaccctgacattctgcttgtactcatcgggcacaaactaacaaagcagcaa
gagaacgctaagtggttcaaaaccttagccgctaacgcttgtgtcgtaaactgtttaaca
cctgatacacaaaggttaccgcaatttgttcagcaacgctgtcgcaagctcaacctgatg
cccgatactcaggcagttcaacttctcgcccaatggcacgagggcaacttactggcactg
tcgcagagcctggaaaagctcactctgctttacccagatggtcaactcactctaccccgt
gtagaagaggctctgagccgccataaccatttcacgccatttcaatggatggatgctctc
ttagctggtaaaggtaaacgagcccaaagaattctgcgtcagttagaagcagaaggcact
gaagccatcatcttgctaagaacggttcaaaaagagttgttactgcttctggaaatgcaa
aaagagtgtgccacccaacctgtaggaagagtcttcgatacccgccgtgtgtggcaaaac
aagcgcccgctctactctgctgcacttcaaaggcttcaggcacaagacattaacaagctt
ctgtctttgactgcccagacagagcgcgatgcaaaaaccagttatgacaaacctgtctgg
ctttcaatggcacaaatttcgcttcaattttgtgagccaaaagcggcgtttggaaccgcc
taa
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