Vibrio nigripulchritudo: VIBNI_A2795
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Entry
VIBNI_A2795 CDS
T02871
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
vni
Vibrio nigripulchritudo
Brite
KEGG Orthology (KO) [BR:
vni00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vni03016
]
VIBNI_A2795 (truB)
Enzymes [BR:
vni01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
VIBNI_A2795 (truB)
Transfer RNA biogenesis [BR:
vni03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
VIBNI_A2795 (truB)
Prokaryotic type
VIBNI_A2795 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
CCO58840
UniProt:
U4K0S4
LinkDB
All DBs
Position
1:complement(2964553..2965497)
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AA seq
314 aa
AA seq
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MGRRRKGRPVNGVVLLDKPTGISSNDALQKVKRIYFAEKAGHTGALDPLATGMLPICLGE
ATKFSQFLLDSDKRYVVIAKLGERTNTSDSDGEVVETRDVNVTEELLLECIEKFKGTTDQ
IPSMFSALKYQGRPLYEYAREGIEVPRESRKITVYSIELLRFEGDEVEMEIHCSKGTYIR
TITDDLGEMLGCGAHVTYLRRTGVANYPYERMVTLEQLNELLEHANDQGLPPKELLDVLL
LPMDTAVESLPEVNLNAELTHMVQHGQPVQVFGAPIEGTVRMTSGDEKLFIGVGEIDDDG
KVAPKRLVVFRDEE
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgggacgtcgtcgtaaaggacgtccggttaacggcgtcgttcttctcgataagccgacg
ggcatttcatcgaatgatgcgctgcaaaaagtaaagcgtatctatttcgctgaaaaggct
gggcacacaggggcgttagatccgctagcaacaggcatgttgccgatttgtctgggcgaa
gcgaccaagttttcgcaattccttttggattcagataaacggtatgtggtgatagccaaa
ctgggtgagcgtaccaatacttcggattcagatggcgaagttgttgaaactcgcgatgtg
aatgtcacagaagaactgcttcttgaatgcattgagaaattcaaaggcacgacggaccaa
attccttcgatgttctcggcgttgaaataccagggtcgcccgctatacgagtacgctcgt
gaaggtattgaagtacctcgtgaatctcggaaaatcacagtctactccattgagttgctt
cgatttgaaggcgatgaagtcgaaatggaaatccactgttctaaagggacgtacattcga
acgattaccgatgacctgggtgagatgctcggttgcggagcacacgtaacgtatctgcgt
cgaaccggtgttgccaattacccttatgagcgcatggtaacgctggagcaactgaacgag
cttcttgagcatgccaacgatcaaggtttgccaccaaaagagttacttgatgtgttgttg
ttgccaatggataccgctgttgaaagcttaccagaggttaacctcaacgcagaactgacg
cacatggttcagcatggtcagcctgttcaggtgtttggcgcaccgattgaaggtacggtt
cgcatgacaagtggggatgaaaaattgtttattggcgttggtgaaatcgacgacgatggc
aaagttgcacccaagcgcttagtggtctttagagacgaagagtaa
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