Vibrio nigripulchritudo: VIBNI_A3630
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Entry
VIBNI_A3630 CDS
T02871
Name
(GenBank) putative Penicillin-binding protein 1C
KO
K05367
penicillin-binding protein 1C [EC:
2.4.99.28
]
Organism
vni
Vibrio nigripulchritudo
Pathway
vni00550
Peptidoglycan biosynthesis
vni01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vni00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
VIBNI_A3630
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
vni01003
]
VIBNI_A3630
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vni01011
]
VIBNI_A3630
Enzymes [BR:
vni01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
VIBNI_A3630
Glycosyltransferases [BR:
vni01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
VIBNI_A3630
Peptidoglycan biosynthesis and degradation proteins [BR:
vni01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
VIBNI_A3630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
Transpeptidase
BiPBP_C
Motif
Other DBs
NCBI-ProteinID:
CCO59602
UniProt:
U4KA79
LinkDB
All DBs
Position
1:3828034..3830229
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AA seq
731 aa
AA seq
DB search
MALKLRKGLVWAASITGVMVVLAVLSFFVANALSPLDLEEKFDHSTTVYSRNGEVLRQFS
NSKGIFRIPILHQIEGEVVSRPVSEVYLSALLEYEDKYFYYHPGFNPFSLARALAQQVVN
GRVISGGSTITMQVARMFYPYERSYWGKVEQIFRALQLELHYSKEEILDLYLTHTPMGGN
IEGVEAGAQRYFGKSAQDLNLTEALTLVVLPQRPTSTRPDRHPERALAARNKVLKRVQSE
LALTDETLKLLLATPLDASRYFPPVLSPLLARRLHLASPEQPTFNTFVDHTLQASIEDLI
AQRSVSWSTALSSAVLVMDNESGEVIAYKGSADFNNLRRYGHVDMVHALRSPGSTLKPFI
YGLALEKRLVHSGSLLMDIPISHGDYQPQNFNRYFSGPIRLDRALQLSKNATVVQVLSQL
GSQQFLDWLSSSHIPLKANDPSLTVALGGVGTNLSGLVSLYSALTRQGTAVHPRYVKDAP
SHVTPLLSPSASWVIFDILSQIPPPERFAPAYGRKVAWKTGTSYGFRDAWSIGVSKKYTV
GVWVGRPDGSPNVGKTGAKQAAPIMFDIFDLLPPESEPILKPENVTASEVCWPSGLMKNS
VESEHCISAQPAWLIDEQAPPTLRFQEPLNTLHKWPTPLLQWSLAKGISLTSETESAAKK
VKILSPQSGMQFFPYPNQTFQLKASIEQVDWYLNDVPIKKSILTFDSMPTGSHTLTACSI
QCDSVDIYVYK
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atggctttgaaactcagaaaaggattggtttgggctgcaagtatcaccggtgtcatggtg
gtacttgcagtcttgtctttttttgttgccaatgctttgtctcctctggatcttgaggaa
aagtttgaccacagcacgactgtctatagtcgcaatggtgaagtcctcagacagttttct
aattccaaaggaatctttcgcataccaatccttcatcagattgagggggaagttgtaagc
cgaccagtgtctgaggtttatctcagcgcccttttggagtacgaagacaagtatttttac
taccacccgggatttaatcccttttcgttggctcgcgcccttgctcagcaagtcgtaaat
gggcgagtcatttctggcggttcgaccattaccatgcaggtcgctcgtatgttctaccca
tatgaacgttcctattggggtaaggttgagcaaattttccgggcgctccagcttgaactt
cactactcgaaggaagagattctcgacctttacctgacgcacacccctatgggtggcaac
attgagggagtagaagcgggtgcccagcgatattttggcaagtcggctcaggatttaaat
ttaacggaagcactgactttagtggtgcttccacagcgcccaaccagcaccagaccagat
cgccaccccgaaagagctctggcggcgagaaacaaagtgttgaagcgcgttcagagtgag
ttagcacttaccgatgaaaccttgaagctcttgttggcgacccctctggatgcctctcgc
tatttcccgcctgttttaagccctcttctggcgagaaggcttcatttagccagccctgaa
cagccaacatttaacacttttgttgatcatactttgcaggcatcgattgaagatttgata
gcacagcgttcagtgagctggtcaaccgcgctgtcgagcgctgttttagtgatggataat
gaatctggggaagtgattgcttacaaaggttctgcggatttcaataacctgcgtcgttat
ggacatgtggatatggtgcacgcattacgctctccgggttccacgctcaagccttttatc
tatggtcttgctctggaaaaaagactggttcacagtggcagtttactgatggatatcccc
atttcgcacggagactatcaaccgcaaaactttaatcgctatttcagtggtcccattcgg
ttagaccgagcgttgcagctttcaaaaaatgccactgttgttcaggtgctgagtcagttg
ggttcgcaacaatttctcgattggctatccagcagccacattcccctcaaagcaaatgac
ccgagccttacggttgcacttggcggagtgggtactaacttatcgggattagtttctttg
tattcagcgcttacccgacaaggcaccgctgttcatcccagatatgtaaaagacgctccc
agccacgtaaccccattactctcgccctctgcaagctgggtaatattcgacatcctctcg
cagatcccgccacccgagcgtttcgcgccagcctatggcagaaaagtggcatggaaaaca
ggcaccagctacggttttcgcgatgcctggtcaatcggggtcagcaaaaaatatacggtc
ggcgtatgggttggcagaccggatggttctcctaacgtgggaaagaccggtgccaaacag
gctgcgcccattatgtttgatatctttgacctgctcccaccagaaagcgaaccaatactc
aagccagagaatgtcactgccagtgaggtttgctggccaagtggactaatgaaaaacagt
gttgaaagcgagcattgtatcagtgcacaaccagcctggctcattgatgagcaagcgcca
ccgacattgcgtttccaagagcctttaaacacgttacacaagtggccgacaccacttctt
cagtggtctttagccaaaggtatttctctaacgagcgagacagaaagtgccgctaaaaaa
gttaagatactctctccacaaagcgggatgcagttttttccttatccaaaccaaactttt
cagttgaaagcatcaatagaacaagttgactggtatttgaatgatgtgccgataaaaaaa
tctattctaacctttgattctatgccaacaggcagccatacgctgacagcgtgctccatt
cagtgtgatagcgtagacatttatgtttacaagtaa
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