Vibrio nigripulchritudo: VIBNI_A3653
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Entry
VIBNI_A3653 CDS
T02871
Name
(GenBank) Putative Capsular polysaccharide biosynthesis protein capD
KO
K24300
UDP-N-acetylglucosamine 4,6-dehydratase [EC:
4.2.1.135
]
Organism
vni
Vibrio nigripulchritudo
Pathway
vni00541
Biosynthesis of various nucleotide sugars
vni00552
Teichoic acid biosynthesis
vni01100
Metabolic pathways
vni01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
vni00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
VIBNI_A3653
00552 Teichoic acid biosynthesis
VIBNI_A3653
Enzymes [BR:
vni01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.135 UDP-N-acetylglucosamine 4,6-dehydratase (configuration-retaining)
VIBNI_A3653
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GFIT
Motif
Pfam:
Polysacc_synt_2
Epimerase
CoA_binding_3
GDP_Man_Dehyd
RmlD_sub_bind
3Beta_HSD
CoA_binding
adh_short
PglD_N
KR
Motif
Other DBs
NCBI-ProteinID:
CCO59621
UniProt:
U4K2X3
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Position
1:complement(3852320..3854269)
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AA seq
649 aa
AA seq
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MQRLQFIWQLSRTNKRIVSVLIDIILIFMAFHLAILVRSGETNYFTYPAVWGIQIAVTVV
TIAVFARLGLYRAVLRYLTFQALFVVTAGAVISATLVAALSFYMSDPFPRTVPIIYGAFL
ALFCGGPRVIVRSLIAQSYSTQSKEVLIYGAGSGGRQLAMALRSSGDYRVRAFIDGDSTL
CNTMILGLPVIAIEDAVPLINKYDVSQVLLAVPSAKRSRRKVILDELAKLPVEVLTVPDM
TDIVSGKAKIDELKDVAIEDLLGRDPVAPQQVLLEANIKDKVVMVTGAGGSIGSELCRQI
VEQSPKSVILFELSEFGLYQIDRELNQLKVEKGLTCDIIPLLGSVQRQHRLETTMAAFEV
QTVYHAAAYKHVPLVEFNVIEGVRNNIYGTYYTACAAIKAGVESFVLISTDKAVRPTNVM
GTTKRMAELGLQALADQEKAKPNGTRFCMVRFGNVLGSSGSVIPVFKKQIASGGPVTVTH
SEITRFFMTIPEAAQLVIQAGAMGKGGDVFVLDMGESVKITDLASNLIQLSGLEVKSEAN
PHGDIEIQFSGLRPGEKLYEELLIGDNVKQTAHERIMTAHEVYLPQEEYDLLLSELDFAC
HSMDHESIRTLLLSAPTGFNPTDGIGDLVWSHNQSKVDYSDSLKFVSQS
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atgcaacgtctacaatttatatggcaactttctcggacgaacaaaagaattgtcagtgtt
ctgattgatattatattgatctttatggcttttcatttggcaattttagttcgctctgga
gaaaccaattatttcacttatcctgcggtttggggtattcaaattgcggtgacagtagtc
acgattgctgtctttgctcgcttagggctttatagggcagttcttcgttacctcaccttt
caagctttatttgtagtgacagctggcgcggtcatttctgctacgctcgtagctgccctt
agtttctacatgagtgacccgtttcctaggacagttcctattatctacggtgcatttctt
gctcttttttgtggtggtcctcgcgttattgtccgatctttgatcgcccaaagctattca
acgcagagtaaagaggttctcatttatggcgcgggatctggcggtcgacagttggcgatg
gcgttaagaagtagtggagactatcgcgtaagagcatttattgatggtgactcaactctt
tgtaatacgatgatcttagggttgcctgttattgccattgaagacgcggtgcctctcata
aataaatatgacgtttctcaagtcttactcgcagtgccaagtgctaaacgttcacgtcgt
aaggttattcttgacgaactggctaagttacctgttgaagtgcttactgttcctgatatg
acagatattgtgtctggtaaagctaaaattgacgagcttaaggatgtcgcgattgaggat
ttactgggtcgtgatccagtcgctcctcaacaagtattgttggaagcaaatattaaagac
aaagtggttatggtcactggggctggtggttctattggttctgaattgtgccgtcaaatt
gtggagcagtcgcctaagtctgttattttatttgaattgtctgagtttgggctatatcaa
attgatagagaattaaatcagcttaaagtagaaaaagggctaacgtgcgatatcattcca
ttattgggttcagtccagcgtcaacatcgcttagaaactacgatggctgcatttgaagtc
caaacggtatatcatgcagcggcatacaaacacgttccattagtcgagtttaatgtaata
gagggagtgcgtaataatatttatggcacttattacactgcatgtgcggccattaaagct
ggcgttgaatcatttgtactaatttctactgataaagccgtccgtcctactaacgtgatg
gggacaactaaacgaatggcagaacttggtttacaggctcttgctgatcaagaaaaagca
aaaccaaatggcactcgattctgcatggtacgatttggcaacgtcctcggttcttcaggc
tccgttattcctgtattcaaaaagcaaattgcatcaggcggaccagtaaccgtgactcat
tcagagatcactcgtttcttcatgacaattcctgaagctgcgcagttagtaattcaggct
ggtgcaatggggaaaggtggggatgtctttgtattagatatgggtgagtcggtcaaaatt
acagacttagcaagtaatctcattcagttgtctggtcttgaagttaaatctgaagctaac
cctcatggtgatatagagattcaattctctggacttcgccctggtgaaaaactttatgaa
gagttactcattggtgacaatgttaagcagacagcgcatgagcgaatcatgactgctcat
gaggtatatttacctcaagaagagtacgacctattgttgagtgaacttgatttcgcctgt
catagtatggatcacgaaagcattcgtacattactattaagcgccccaacaggctttaat
cctacagatggtattggcgacttagtctggagccataatcaatctaaagttgattattca
gactctttaaagttcgtgagccaatcttag
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