Vibrio nigripulchritudo: VIBNI_A3702
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Entry
VIBNI_A3702 CDS
T02871
Symbol
slmA
Name
(GenBank) HTH-type protein slmA
KO
K05501
TetR/AcrR family transcriptional regulator
Organism
vni
Vibrio nigripulchritudo
Brite
KEGG Orthology (KO) [BR:
vni00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vni03000
]
VIBNI_A3702 (slmA)
03036 Chromosome and associated proteins [BR:
vni03036
]
VIBNI_A3702 (slmA)
Transcription factors [BR:
vni03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
VIBNI_A3702 (slmA)
Chromosome and associated proteins [BR:
vni03036
]
Prokaryotic type
Chromosome partitioning proteins
Inhibitors of FtsZ assembly
VIBNI_A3702 (slmA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SlmA-like_C
TetR_N
TetR_C_15
TPR_22
HTH_AsnC-type
DUF6262
TetR_C_24
HTH_11
HTH_24
TetR_C_4
GCP_C_terminal
HTH_10
HTH_Tnp_1_2
TetR_C_13_2
HTH_6
HTH_7
TetR_C_13
TetR_C_6
HTH_20
Motif
Other DBs
NCBI-ProteinID:
CCO59668
UniProt:
U4KFQ4
LinkDB
All DBs
Position
1:3898649..3899239
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AA seq
196 aa
AA seq
DB search
MTGNRKSNRREEILQALAEMLESADGASRITTAKLAKQVGVSEAALYRHFPSKARMFEGL
IEFIEDALMSRINRILDEEKDTLQRIRLVMQLILAFSERNPGLTRILSGHALMFENERLR
ERINQLFERIETQLRQILRERKLREGKSFPVDENILATQLLGQVEGSLNRFVRSDFKYQP
TDNFEEYWALLSAQIQ
NT seq
591 nt
NT seq
+upstream
nt +downstream
nt
atgaccggcaaccgaaaatccaatcgtcgtgaagaaatcctgcaggcactggctgagatg
ctggaatccgctgatggagcatcccgcattactacagctaaactagccaaacaggtaggc
gtctcagaagccgcgttataccgtcatttcccaagcaaagctcgcatgtttgaagggctg
atcgaatttatcgaagatgccctaatgtcacgtatcaatcgtatccttgatgaagaaaaa
gacacacttcaacgtattcgcctcgtcatgcagctcattctggcattttcggaacgcaac
ccaggtctcacacgtattctatctggtcacgctctgatgtttgaaaatgagcgtttaaga
gaacgcatcaatcagctgttcgaacgcatcgaaactcagcttcgccagatcctacgtgaa
cgcaagttacgtgaaggcaaatctttccctgtggatgaaaacatccttgcgactcaacta
cttggtcaggtagaaggcagcttaaaccgctttgtccgttccgattttaaatatcagcca
accgacaattttgaggaatactgggcactactgagtgcgcagattcagtga
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