Vibrio nigripulchritudo: VIBNI_A3711
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Entry
VIBNI_A3711 CDS
T02871
Symbol
rpoZ
Name
(GenBank) DNA-directed RNA polymerase subunit omega
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
vni
Vibrio nigripulchritudo
Pathway
vni03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
vni00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
VIBNI_A3711 (rpoZ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vni03021
]
VIBNI_A3711 (rpoZ)
03400 DNA repair and recombination proteins [BR:
vni03400
]
VIBNI_A3711 (rpoZ)
Enzymes [BR:
vni01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
VIBNI_A3711 (rpoZ)
Transcription machinery [BR:
vni03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
VIBNI_A3711 (rpoZ)
DNA repair and recombination proteins [BR:
vni03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
VIBNI_A3711 (rpoZ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
AmiR_N
Motif
Other DBs
NCBI-ProteinID:
CCO59676
UniProt:
U4K336
LinkDB
All DBs
Position
1:3907231..3907503
Genome browser
AA seq
90 aa
AA seq
DB search
MARVTVQDAVEKIGNRFDLVLIAARRARQMQTGGKDSLVPEENDKPTVIALREIEEGLIT
KEVLDARERQEQQEQEAAELAAVSSIAHNR
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atggcacgcgtaactgtacaagacgctgttgaaaaaattggcaaccgtttcgacttggtt
ctgattgcggcacgccgcgctcgtcaaatgcaaactggcggcaaagattcactagtgcca
gaagagaacgataagccaacggttatcgcacttcgcgaaatcgaagaaggtcttatcacg
aaagaagttctggatgctcgtgagcgtcaagagcagcaagaacaagaagcagcagaactg
gcggcagttagcagcatcgctcacaaccgttaa
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