Vibrio nigripulchritudo: VIBNI_A3740
Help
Entry
VIBNI_A3740 CDS
T02871
Symbol
rsmD
Name
(GenBank) Ribosomal RNA small subunit methyltransferase D
KO
K08316
16S rRNA (guanine966-N2)-methyltransferase [EC:
2.1.1.171
]
Organism
vni
Vibrio nigripulchritudo
Brite
KEGG Orthology (KO) [BR:
vni00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vni03009
]
VIBNI_A3740 (rsmD)
Enzymes [BR:
vni01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.171 16S rRNA (guanine966-N2)-methyltransferase
VIBNI_A3740 (rsmD)
Ribosome biogenesis [BR:
vni03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
VIBNI_A3740 (rsmD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cons_hypoth95
TRM5-TYW2_MTfase
MTS
Methyltransf_37
Methyltransf_31
MethyltransfD12
Methyltransf_15
Methyltransf_25
RsmJ
TRM
Methyltr_RsmB-F
PrmA
SAM_MT
DNA_methylase
Methyltransf_ANTKMT
Methyltransf_12
Methyltransf_16
Methyltransf_32
Motif
Other DBs
NCBI-ProteinID:
CCO59704
UniProt:
U4KHN3
LinkDB
All DBs
Position
1:3954389..3954988
Genome browser
AA seq
199 aa
AA seq
DB search
MARRRQSNSSQKKQSSGFVRIISGLWRGRKLPVHDAEGLRPTTDRVKETLFNWLAQDVPQ
ANVLDLFAGSGGLGFEAASRQASRVTMLEMNPQAHKQLLANIQTLKTDSIEAIHADTLDF
LKQTGTAHDVVFIDPPFRKDLLDDVIHLLEQNGWLSANAMIYIEAEKELALDSIPAHWQL
YREKTAGQVCYRLFEREEK
NT seq
600 nt
NT seq
+upstream
nt +downstream
nt
atggcaagacgtcgtcagtcaaactcatcacaaaaaaaacaatccagtggctttgtcaga
atcatcagcgggctttggcgcggcagaaaactcccggttcacgatgctgaagggctgcgc
ccaactaccgaccgagtcaaagaaaccttattcaactggctggctcaggatgtccctcaa
gcgaatgttttggacctttttgcaggttcgggcgggcttgggttcgaagcagcaagccgt
caggcaagccgtgtcactatgttggaaatgaatcctcaggcacacaagcaattgcttgcc
aatattcaaacgctgaagactgattccattgaagccattcatgccgatacgttggacttt
ttaaaacagaccggcactgcacacgatgtggtgtttatagacccgccttttcgaaaagac
ctgctggacgatgtgatacatttgcttgaacaaaatggctggttaagcgccaatgcgatg
atttatattgaagcggaaaaagagctggctctggattccattccggctcattggcaactg
taccgcgagaaaaccgcggggcaggtttgctaccgtttgtttgaaagggaagagaaatga
DBGET
integrated database retrieval system
