Vibrio nigripulchritudo: VIBNI_A3767
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Entry
VIBNI_A3767 CDS
T02871
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
vni
Vibrio nigripulchritudo
Pathway
vni00300
Lysine biosynthesis
vni00470
D-Amino acid metabolism
vni01100
Metabolic pathways
vni01110
Biosynthesis of secondary metabolites
vni01120
Microbial metabolism in diverse environments
vni01230
Biosynthesis of amino acids
Module
vni_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
vni00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
VIBNI_A3767 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
VIBNI_A3767 (dapF)
Enzymes [BR:
vni01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
VIBNI_A3767 (dapF)
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GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
CCO59731
UniProt:
U4K396
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All DBs
Position
1:complement(3978807..3979637)
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AA seq
276 aa
AA seq
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MHFHFSKMHGLGNDFMVVDCITQNVFFSPDLIRRLADRHTGIGFDQLLVVEAPYDPETDF
HYRIFNADGSEVEQCGNGARCFARFVRMKGLTNKHAISVSTKKGKMVLNIEEGDQVTVNM
GEPVFEPSKIPFKAKQKEKTYILRAEDKTLFCGAVSMGNPHVVTVVDDTETADVDTLGPL
LESHERFPERVNAGFMQIISRNEINLRVYERGAGETQACGSGACGAVAVGILQELLDNEV
KVHLPGGELKIRWQGPGKPLYMTGPATHVFDGQLSC
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgcactttcatttttctaagatgcacggattgggtaacgactttatggtcgtggattgt
attacccaaaatgtgtttttttctccggatttgatccgccgtctggcggatcgtcatacc
ggaatcgggttcgatcaactgctggtggttgaagccccttacgatccggaaacagacttc
cactatcgcatctttaatgcggatggtagcgaagtggagcagtgtggcaacggcgctcgt
tgttttgcacgctttgtccgaatgaaagggctgaccaacaagcacgccattagcgtaagc
accaagaaaggcaaaatggtgctgaatattgaagaaggggatcaggtgaccgtcaatatg
ggtgagcctgtgtttgaaccttcgaaaatcccgtttaaagccaagcagaaagagaaaact
tatatcctgcgtgccgaagacaagaccttattctgtggtgctgtcagcatggggaatcct
cacgtggtcactgtggttgatgatacggaaacggcagacgtcgataccctaggtccattg
cttgaatctcatgaacgttttcctgaacgagtgaatgccggttttatgcagatcatctct
cgcaatgaaattaaccttcgtgtttatgagcgcggtgctggcgaaactcaagcatgcgga
agtggcgcttgtggtgccgttgccgttggtatcctgcaggagctgctggacaacgaagtg
aaagttcatctaccaggtggtgaactgaaaattcgttggcagggaccgggaaaaccgctt
tatatgacgggtccggcgactcatgtatttgatggtcagttaagttgctag
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