Vibrio nigripulchritudo: VIBNI_A3829
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Entry
VIBNI_A3829 CDS
T02871
Symbol
rimN
Name
(GenBank) Putative ribosome maturation factor rimN
KO
K07566
L-threonylcarbamoyladenylate synthase [EC:
2.7.7.87
]
Organism
vni
Vibrio nigripulchritudo
Brite
KEGG Orthology (KO) [BR:
vni00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vni03009
]
VIBNI_A3829 (rimN)
03016 Transfer RNA biogenesis [BR:
vni03016
]
VIBNI_A3829 (rimN)
Enzymes [BR:
vni01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.87 L-threonylcarbamoyladenylate synthase
VIBNI_A3829 (rimN)
Ribosome biogenesis [BR:
vni03009
]
Prokaryotic type
Other maturation factors
VIBNI_A3829 (rimN)
Transfer RNA biogenesis [BR:
vni03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
VIBNI_A3829 (rimN)
Prokaryotic type
VIBNI_A3829 (rimN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sua5_yciO_yrdC
Motif
Other DBs
NCBI-ProteinID:
CCO59780
UniProt:
U4KAJ4
LinkDB
All DBs
Position
1:complement(4044464..4045021)
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AA seq
185 aa
AA seq
DB search
MTNFENTVQALRDGEVIAYPTEGVFGVGCDPDNAEAIMKLLELKKRPVEKGLILIAANFD
QLKPYVDESALSEEAKAAVFATWPGPVTWVMPAKPELSNLLSGQFDSIAVRVTDHPLVQK
LCETFGKPLTSTSANLTGEPPCMTFQEVQAQLGDHLVAILEGETGGREKPSEIRDALTSQ
VLRQG
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
ttgaccaattttgaaaacacagttcaagcgctgcgcgatggcgaagtgattgcttaccct
acggaaggcgtatttggtgtgggctgtgaccctgacaatgctgaagccattatgaagctg
ctggagcttaagaaacgcccggtcgaaaaagggctgattcttattgctgcaaattttgat
caattaaagccttacgtagatgagagtgcgctaagtgaagaagcaaaggcggctgtgttt
gcgacctggccaggtcctgttacctgggtgatgccagcgaagccagagctgtcaaacctg
ctttcgggtcagtttgactcaattgcggtacgcgtaactgaccaccctctggttcaaaaa
ctttgcgagacgttcggtaaaccgctaacctctaccagcgccaacctgacaggtgagcct
ccatgcatgacttttcaggaagttcaggctcaactgggcgatcatttagtggcgattctg
gaaggcgaaacgggtggacgcgagaagccaagtgaaattcgcgacgctttgacttcccaa
gtattaagacaggggtaa
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