Vibrio nigripulchritudo: VIBNI_B0130
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Entry
VIBNI_B0130 CDS
T02871
Symbol
rbsR
Name
(GenBank) Ribose operon repressor
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
vni
Vibrio nigripulchritudo
Brite
KEGG Orthology (KO) [BR:
vni00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vni03000
]
VIBNI_B0130 (rbsR)
Transcription factors [BR:
vni03000
]
Prokaryotic type
Helix-turn-helix
LacI family
VIBNI_B0130 (rbsR)
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Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
Peripla_BP_4
LacI
MarR_2
HTH_24
HTH_38
HTH_Tnp_ISL3
HTH_3
HTH_Crp_2
HTH_35
TetR_N
HTH_31
Motif
Other DBs
NCBI-ProteinID:
CCO59959
UniProt:
U4KHY3
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Position
2:143572..144597
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AA seq
341 aa
AA seq
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MATMKDIARLAGVSTSTVSHVINKTRFVSEEISERVNNAAKELNYYAPSAIARSLKLNRT
QTIGMLVTTSTNPFFSEIVRGVEESCYQNGYNLILCNTEGDNERMKTSIDTLLQKRVDGL
ILMCSTVEGERIEVFDRHPDVPVVVMDWGPMLFTSDKIQDNSLHGGYLAVKYLIEQGHHN
IGCITGPLSKHQAQMRYEGYKRAMNEAGLKVSSKWIVESDFECDGGYQAFNTMYERGALP
SAIFVCNDMMAMGVINAASEKDISVPEDVSLIGYDDVHIAKFMTPSLTTIHQPKHELGKA
AVNALLKKLEKETSEHQVVQLEPSLITRNSVKNLPDPNTSK
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atggcgacaatgaaggacattgccaggcttgctggcgtttctacttccacagtcagtcat
gtgatcaacaagacccgattcgttagcgaagagatttcggaacgggtaaataacgctgcc
aaagaacttaactattacgcaccttcagccattgcccgaagtttgaagctcaatcgcact
caaaccattggcatgttggtgaccacctcaacgaacccgttttttagcgagatagtgaga
ggagtagaggagagttgctaccaaaatgggtataacctcattctttgcaataccgaaggg
gataacgagcgaatgaaaacctccatcgataccctgctgcaaaaacgagtcgatgggttg
attttgatgtgttcgacggtcgagggtgaacgaatcgaagtgttcgaccgacaccctgac
gtgcctgtggtggtgatggactggggacctatgctgtttaccagcgataagatacaggac
aactctttgcatggcggttatctggcagtgaaatacctgattgagcaaggtcaccacaat
attggctgcattacagggccgcttagcaaacatcaggcacaaatgcgttacgaaggctac
aaacgtgcgatgaatgaagcagggctgaaggtttcatccaaatggattgtagaatcggat
tttgaatgtgatggtggctaccaagcttttaatactatgtatgagaggggagctctgccg
agtgcaatttttgtctgtaacgacatgatggcaatgggagtgatcaatgccgccagcgaa
aaggacatttccgttccagaagacgtctccctgattggctacgatgatgtccatatcgca
aagttcatgaccccttctttaacgacaattcatcagccaaaacatgaattaggtaaagca
gcagtgaatgcgctgctgaagaaactggaaaaagaaacctcagagcatcaggtggttcag
cttgaaccttcgcttattactcgtaatagcgtgaaaaatttgcctgatccgaacacatca
aagtga
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