Vibrio nigripulchritudo: VIBNI_B0307
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Entry
VIBNI_B0307 CDS
T02871
Name
(GenBank) putative succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
vni
Vibrio nigripulchritudo
Pathway
vni00300
Lysine biosynthesis
vni01100
Metabolic pathways
vni01120
Microbial metabolism in diverse environments
vni01230
Biosynthesis of amino acids
Module
vni_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
vni00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
VIBNI_B0307
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
vni01002
]
VIBNI_B0307
Enzymes [BR:
vni01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
VIBNI_B0307
Peptidases and inhibitors [BR:
vni01002
]
Metallo peptidases
Family M20
VIBNI_B0307
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
CCO60127
UniProt:
U4KBF7
LinkDB
All DBs
Position
2:329475..330593
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AA seq
372 aa
AA seq
DB search
MDAVSLTQRLINIQTLNPPGDEQECSRYLTSLLELEGFQVRTHCFGEGRVNLIAEMSGAE
GGEPLGFTGHMDTVPLGNADWGKSPFGGEIEKGRLYGRGSSDMKSGIAAFISACIKNKAA
IKEGKGVVLILTGGEETGCDGAKAMVADNVDFPEVGALIVGEPTSNYPVIGHKGALWLKA
SFKGVTAHSAMPEQGHNAIYDASEAVFSLKHLSIGESHSLMGSTTLNIGTIQGGININSV
PDHCDFHIDIRTVEGMNHSCVSQKIQQLIGVQGHLETVMDLPPMLSDASHPWINLCYQVC
QVDSSKELKPAIMPYFTDAAILKPRLNHIPTVLLGPGSPEMAHQTDEYCYVENIVRAVDI
YGELISSWQINT
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atggacgcggtatccctgacgcaacggctgatcaacattcagacacttaacccgcctggt
gatgagcaagaatgttcgcgttacctcacgtcacttctggaactggaaggttttcaggtt
cgcactcactgttttggtgaagggcgggtaaacctgatagcggaaatgtcaggagcagaa
ggaggggagccgcttggctttactggtcatatggataccgtgccactgggcaatgctgac
tgggggaaatcaccatttggtggtgaaatcgaaaaaggacgtctgtatgggcgaggctcc
agtgatatgaagtccggcattgcagcgtttatatcagcatgcatcaaaaacaaggcggcg
atcaaagaaggcaaaggggtcgttcttattctgacaggcggagaagagacgggctgcgac
ggagcaaaagccatggtcgccgacaacgttgatttccccgaagttggcgcgttgatcgtc
ggcgaacccaccagtaattacccggtaattgggcacaaaggtgcgctgtggctgaaagca
tcttttaagggagtcaccgcccatagcgcaatgccagagcaggggcacaatgcgatttat
gatgcgtcggaagcggtgttttctctgaagcatttatcgattggagaaagccactctctg
atgggaagcactactttgaacattggcactattcaagggggaatcaacatcaactctgtg
cccgatcattgtgacttccatatcgatatccgtaccgtagaaggcatgaatcattcttgc
gtcagtcagaaaattcagcagctaattggtgttcaggggcacttagaaacggtcatggat
ttgccgcctatgctctcagacgccagtcatccgtggataaacttgtgctatcaagtgtgt
caggtagattcgtccaaagaactgaaaccggcgatcatgccttactttaccgatgcagcc
atccttaagccgcggttgaaccatataccgactgtcttgttgggaccgggaagtccagag
atggcgcatcagacagacgaatactgttatgttgagaatattgttcgggctgttgatatc
tatggagaactgatttcttcctggcagataaacacgtaa
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