Vibrio nigripulchritudo: VIBNI_B0816
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Entry
VIBNI_B0816 CDS
T02871
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
vni
Vibrio nigripulchritudo
Pathway
vni00260
Glycine, serine and threonine metabolism
vni00460
Cyanoamino acid metabolism
vni00630
Glyoxylate and dicarboxylate metabolism
vni00670
One carbon pool by folate
vni00680
Methane metabolism
vni01100
Metabolic pathways
vni01110
Biosynthesis of secondary metabolites
vni01120
Microbial metabolism in diverse environments
vni01200
Carbon metabolism
vni01230
Biosynthesis of amino acids
vni01240
Biosynthesis of cofactors
vni04981
Folate transport and metabolism
Module
vni_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
vni00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
VIBNI_B0816 (glyA)
09102 Energy metabolism
00680 Methane metabolism
VIBNI_B0816 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
VIBNI_B0816 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
VIBNI_B0816 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
VIBNI_B0816 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
VIBNI_B0816 (glyA)
Enzymes [BR:
vni01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
VIBNI_B0816 (glyA)
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
DegT_DnrJ_EryC1
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
CCO60603
UniProt:
U4KCI5
LinkDB
All DBs
Position
2:complement(834146..835444)
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AA seq
432 aa
AA seq
DB search
MNNKSYQNHSLENFFSTNLSATDDAVFAGIQAENARQNDQIELIASENIVSKAVMQAQGT
CLTNKYAEGYPGRRYYGGCEHVDTVEAIAIERAKKLFNCEFANVQPHSGAQANGAVKLAL
LQPGDTILGMSLDAGGHLTHGARPALSGKWFNAVQYGVDKETLEINYEDVRALAKEHQPK
MIIAGGSAIPRVIDFAKFREIADEVGAILMVDMAHIAGLIATGAHPSPLPHAHVVTTTTH
KTLRGPRGGMILTNHEDIIKKINSAVFPGLQGGPLMHVIAAKAVAFGEALGPEFKTYIDT
VVSNAKVLAEVLQNRGCDIVTGGTDTHLMLVDLRPKGLKGNQTEEALERAGITCNKNGIP
FDSEKPMITSGIRLGTPAGTSRGFGNEEFKQIGEWIGDVLDGLVESPEGNAEIEQHVKKQ
VKELCNRFPLYQ
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgaacaacaagtcttaccaaaaccacagcctggagaacttcttctctactaacctctct
gcaaccgatgacgctgtctttgccggaattcaggcagaaaatgctcgccagaacgatcag
attgagcttattgcttctgaaaacatcgtctctaaagccgtaatgcaggcacaaggcaca
tgcctgaccaacaaatacgcagaaggttatccgggtcgtcgctactacggcggatgtgaa
cacgttgataccgttgaagcgattgctatcgaacgagcgaaaaaactgttcaactgtgaa
tttgcaaacgtacaaccccactccggcgcacaagccaatggtgcagttaaactggcactt
cttcagccaggcgacaccattttaggcatgtcactggacgctggcggccacctgactcac
ggtgctcgtcctgccctttcaggcaaatggttcaacgccgttcaatatggcgtggacaaa
gaaacacttgaaatcaattacgaagatgttcgtgctctggcaaaagaacaccaaccaaaa
atgatcattgctggtggcagcgccattcctcgcgtgattgattttgctaaattccgtgaa
atcgcggacgaagtgggcgcgattctaatggtcgatatggcgcacattgcgggtcttatc
gcaactggtgcacacccaagcccactgccacacgctcatgttgtcactacaacaactcac
aaaacacttcgcggccctcgcggtggcatgattctgaccaatcacgaagacatcatcaaa
aaaatcaactccgcagtattccctggtttgcagggcggtcctctcatgcacgtgatcgcc
gcaaaagccgtcgcgtttggtgaagctttgggaccagaattcaaaacttacattgatact
gtggttagtaacgcaaaagttttagccgaagtgttgcaaaatcgtggctgtgacatagtg
actggtggcaccgacactcatctgatgctggttgaccttcgcccgaaaggactgaaaggc
aatcagacagaagaagcgttggagcgcgctggtatcacatgtaacaaaaacggcatacca
tttgattcagagaagcctatgattacatcaggcattcgcttaggtacgcctgccggaaca
agccgcggtttcggtaatgaagaatttaaacagatcggagagtggatcggtgatgtactt
gacggcttagttgaaagccctgaaggcaacgcagaaatcgagcaacacgttaagaaacaa
gtgaaagagctctgcaatcgcttcccactctaccaataa
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