Vibrio nigripulchritudo: VIBNI_B1258
Help
Entry
VIBNI_B1258 CDS
T02871
Name
(GenBank) putative ABC-type antimicrobial peptide transport system, permease component
KO
K02004
putative ABC transport system permease protein
Organism
vni
Vibrio nigripulchritudo
Brite
KEGG Orthology (KO) [BR:
vni00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vni02000
]
VIBNI_B1258
Transporters [BR:
vni02000
]
ABC transporters, prokaryotic type
ABC-2 type and other transporters
Putative ABC transporter
VIBNI_B1258
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FtsX
MacB_PCD
OATP
Motif
Other DBs
NCBI-ProteinID:
CCO61019
UniProt:
U4KH67
LinkDB
All DBs
Position
2:1284839..1287361
Genome browser
AA seq
840 aa
AA seq
DB search
MSAGVCMSLNENRHIRSTLAIFVAHYRQAPLQAVAILIGIVLAVTLFVAVQAINLNAKRS
YAESTEQLSGQAQSLILPLSGQHYLPESVYFSVRQAGLNQALPVIEGRVRDNQGRRWSIQ
GSDLISAITSQFNKQIPRQQNATTESSSVSLFDSKLPLARLLAGEPLVLVSQSHHESIGG
VSQLILEGVETDVIAVPDQWQLGSRMLMDIGFAQQLMKKEGRLSYIAVFDKQGTEASNWE
RFLDQKAQWVTNTQSTDLGSLTDSFHLNLTAMSMLAFLVGLFIAYNGVKYSLLKRNRLLV
QIQQAGITQKTVFSSLLIELIFLVTLGSSLGFVMGIQLSHWLHPMVALTLEQLYGATLLP
GTWFWHWWLQALGLTLVATLAACWQHFKQRVNQPLSSHSGLYQTPENSNENRLFFIAVVL
SASALIGLWASDYFRFTMVWLGVLIVSIPLFLPKAMSTLSRWAVRKTTSGLMLYLFAELK
ELIAPLSLAMMALLLAVTANIGMNTLVGSFEFTLKQWLEQRLHADIYVSPSQSKMAEVEQ
ALYQFEGVDKVYKQYYVDEKILGLPTLLGTKDPSTLEQTMVFKSHTPDFWDNFYSGKVVA
ISEPTAVKLNLELENDFVVDALSNKALKVGAIFHDYGSPNGEVLISPDLWNQLGFSPTPT
SLGVKVSGNIEQVQKALIQRLELHSSQLYDQAEIKSIALEIFSRTFSITSALNGVTLLVA
VIGLFSACFMLLEARKAAIARLHAIGVSRAKLMGLVLGQIAALVAFTLMVALPLGAIVGY
VLTDIITLRAFGWSLNYLWSWSDTLVLVLVTLSSALIATALPLWRLVSRPLISSLQSEVL
NT seq
2523 nt
NT seq
+upstream
nt +downstream
nt
ttgtcggcgggtgtttgcatgagtctaaatgagaacaggcatattcgctccacactcgcc
attttcgtcgcacattaccggcaggcgccacttcaagccgtcgcaatattgattggcatt
gttctagcggtaactttatttgtcgcggtgcaagccattaatctcaatgccaaacgcagt
tatgccgaatcaacagagcagcttagcggacaggcacaaagcctcatcctccctctttcc
ggtcaacactacctgcccgagtctgtctatttttcagtgcgtcaggcaggattaaaccaa
gccttacctgttattgaaggacgcgtgagagacaatcagggacgtcgttggtcaatacaa
ggcagtgatttaatctctgccataacttctcagtttaataagcaaattccacgtcagcaa
aacgcaacaactgaaagctcatctgtctctctgtttgattcaaaattgcctctggcaagg
cttcttgctggtgagccattggtccttgtcagccagtcacatcacgaaagcatcggcgga
gtcagtcaactcattctggaaggagtagaaacggacgtcattgcggttcccgaccagtgg
caactgggtagcagaatgctaatggatatagggtttgcgcaacaactgatgaaaaaagaa
ggcaggcttagttatatcgccgtttttgataaacagggaaccgaagcatcaaattgggaa
aggttccttgaccaaaaagcgcaatgggtcactaacacacaaagcaccgacctcggttca
cttaccgatagctttcacctgaacctaacagccatgagtatgctggcgtttctggtcggg
ctgtttatcgcctacaacggggtgaaatacagtttactcaagcgaaatcgcttactggtt
cagatccagcaagcgggtatcacccagaaaaccgttttttcaagtctgcttatcgaactg
atctttctggttaccctaggatcgtctctcggtttcgtcatgggcattcaactgagccac
tggctgcaccctatggtcgctctgacgttagaacagctttacggcgcgactctgcttccc
ggaacctggttctggcactggtggttacaagctttggggttaacccttgtagctacatta
gcggcgtgctggcagcatttcaaacagcgcgtgaatcaacccctttcttctcacagtggt
ttatatcaaacaccagaaaactcgaatgaaaaccgactgttcttcattgcagtcgttttg
tctgcttccgcactgattgggctctgggctagtgattattttcgcttcaccatggtctgg
ctgggtgtattgatcgtctccattccactgttcctacctaaagcgatgagtactctttcg
cgttgggctgtcaggaaaaccacgtctggtctcatgctttatctctttgcggaactgaaa
gaactgattgccccgctttcactcgctatgatggcgttacttttggcggtcaccgcaaac
atagggatgaataccttagtcgggagctttgaattcacgttaaaacaatggttggagcaa
agactgcatgccgatatctatgtcagcccatctcagagcaaaatggctgaagttgaacag
gcgctatatcagtttgagggcgtcgataaagtttataaacaatattatgtcgacgaaaaa
attctgggtttaccgactttgctaggcactaaagatccgtccacgcttgagcaaaccatg
gtttttaaatctcatacacctgatttttgggataacttttattcaggtaaagtcgttgca
atcagcgagcccaccgccgttaaacttaacctggagttagaaaatgattttgttgtcgat
gctttgtccaacaaggcgcttaaagtaggcgccattttccatgactatggttcaccaaat
ggtgaagttttgatttctccagatctatggaatcaacttgggttttcacctacccccacc
agccttggagtgaaagtatctggcaatatcgagcaggttcagaaagcgctaatccaaagg
ctggaacttcattcaagccagctctatgatcaggcagaaatcaaatccatcgcgctagag
atattctcacgtaccttctctataaccagtgctctaaatggcgtcacactgctggtcgcg
gttatcgggttattcagcgcatgttttatgttgctcgaagctcgcaaagccgccattgct
cggctccatgcaattggagttagccgagcaaaactaatgggattagttctgggtcagatt
gcggcgttagtcgcgttcactcttatggtcgcattacctttgggtgccattgtgggttac
gtacttaccgacatcatcacgcttcgcgcatttggctggagccttaattacttatggagc
tggagtgacaccttggtccttgtgcttgtcaccctttcctcggcgcttatcgcaacggca
ttacctttatggcgcttagtgagccgccctcttatctccagcttacaaagcgaggtgctt
tga
DBGET
integrated database retrieval system
