Vibrio nigripulchritudo: VIBNI_B1504
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Entry
VIBNI_B1504 CDS
T02871
Symbol
dctD
Name
(GenBank) C4-dicarboxylate transport transcriptional regulatory protein dctD
KO
K10126
two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
Organism
vni
Vibrio nigripulchritudo
Pathway
vni02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
vni00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
VIBNI_B1504 (dctD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
vni02022
]
VIBNI_B1504 (dctD)
Two-component system [BR:
vni02022
]
NtrC family
DctB-DctD (C4-dicarboxylate transport)
VIBNI_B1504 (dctD)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
Mg_chelatase
AAA_16
AAA
BrxC_BrxD
MCM
AAA_2
AAA_7
Motif
Other DBs
NCBI-ProteinID:
CCO61253
UniProt:
U4KE17
LinkDB
All DBs
Position
2:complement(1532320..1533660)
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AA seq
446 aa
AA seq
DB search
MDSQIVLIEDDDIVRQATSQWLQLAGFSVTEFADGTSALEGISPTFTGVIVSDVRLPDSD
GLTLMNAILNRVPNVPIVLVTGHGDVDMAVKALREGAYDFLEKPFDPDRLIDTVSDAFSS
LQAKKESQQRLDYLEQLDGLEQILIGQSEAMVNLRQQLAKIAAMDTNVIVYGETGCGKEL
VANCLHKLSRRSVHRFVPINCSAIPENLFESELFGHEAGAFTGAGKQRIGKLEYADKGTL
FLDEIESMPLSMQVKVLRTLQEHTVERVGANQPINIDLRVVAAAKDNLFDHPNFRQDLYY
RLNVAQLTLPPLRERDKDVVLLFEHYSRQANSSCRPATLSDKQTLLSYGWPGNVRELKNV
ATRFAHDDLSVADILSESASLSSEPVVNTLSLATQVHNFERKVIDKSLREHKGNITQVMA
ELDLPRRTLNQKMQKYGLSRQDYLGK
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atggattctcaaatcgtactcatcgaagacgacgacatcgttcgtcaggcgacaagccaa
tggcttcaactggcgggcttttcggtgacggagtttgccgatggtacatctgcattagaa
ggaatctctcccactttcaccggtgtgattgtcagtgacgtcaggctgccagattccgat
ggtctgactctgatgaatgccattttgaaccgagtccctaatgtgccaatcgttttggtg
acagggcatggtgatgtggacatggcggttaaagcgctgcgagaaggagcttatgatttt
ctggaaaagcctttcgacccagacagattgattgacaccgtcagtgatgccttctcctct
ttgcaggcgaagaaggagagtcagcagcgtctcgattatctggagcagttggatgggtta
gagcagattttgattggtcagagtgaagccatggtgaatctccgacagcaattagccaaa
attgcagccatggataccaatgtgatcgtttatggtgaaacggggtgtggtaaagagctg
gtggcgaactgccttcacaaactgagcagacggagcgtgcaccggtttgttccaataaac
tgctccgccattccagaaaacctgttcgaaagtgagttgtttgggcatgaagccggtgcc
ttcacaggggcaggaaagcagcgaataggaaagctggagtacgccgataaaggcactttg
tttctggatgaaatagaaagtatgccgctttcaatgcaggtaaaagtgctcaggactctg
caagaacacactgtcgaaagggtgggagcgaatcagcccatcaatatagatctgagagtt
gtcgctgctgctaaagacaatctgtttgatcacccaaatttccgacaagatctctattac
cgcctgaacgttgctcaactgactcttccccctctcagagaacgagataaggacgttgtg
cttctatttgagcattactcccgtcaggcaaattcaagctgcagaccagccacactgagc
gacaaacaaacgctgctgagttatggctggccgggcaatgtacgtgaacttaagaatgtg
gcgacgcgttttgcgcatgatgatctgtctgttgccgacatactttctgagtctgcgtca
ctgagctctgagccggtcgttaacacgctttctctggcaactcaggtacacaatttcgaa
agaaaagtgatcgacaaatcgctaagagagcacaaagggaacatcactcaggtgatggct
gaactcgacctacctcgccgaacccttaatcaaaaaatgcaaaagtacgggttaagccga
caagattatttgggtaagtaa
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