Vibrio nigripulchritudo: VIBNI_B1633
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Entry
VIBNI_B1633 CDS
T02871
Name
(GenBank) putative DNA-binding transcriptional regulator CsgD
KO
K20918
LuxR family transcriptional regulator, positive regulator of biofilm formation
Organism
vni
Vibrio nigripulchritudo
Pathway
vni05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vni00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
VIBNI_B1633
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vni03000
]
VIBNI_B1633
Transcription factors [BR:
vni03000
]
Prokaryotic type
Helix-turn-helix
LuxR family
VIBNI_B1633
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VpsT-like_REC
GerE
HTH_23
Sigma70_r4_2
HTH_24
Sigma70_r4
HTH_11
DUF7342
HTH_VMAP-M9
HTH_20
HTH_40
Sigma70_ECF
HTH_10
HTH_28
HTH_Tnp_ISL3
GNVR
Motif
Other DBs
NCBI-ProteinID:
CCO61366
UniProt:
U4KE27
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All DBs
Position
2:complement(1666910..1667563)
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AA seq
217 aa
AA seq
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MFTLITNNTMQSQLLQRSLEESLHIYMETLQLKSILENEDIHLSLPSDSFVVIDMSVICD
EFLSKYLKYKKRHFPQCQEVLLNCEKELEYKSLMNWPNLVGVFYLDDSIDTLSKGINAIQ
NGDMWLSRKLAQEYIVYYRQRQTNTTNDLYSKLTRREQQIIRHLAKGATNTEIADKLFVS
ENTVKTHLHNLFKKIHAKNRLQALIWAKENISQEELV
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
gtgtttaccctaataacaaataacacaatgcaatcgcagctgcttcagcgatctttggaa
gaatctctccatatttatatggaaacgcttcaattaaagtcgatattggaaaacgaagat
attcatctttctctcccttctgatagcttcgttgtcattgacatgagcgtaatttgtgat
gaattcttatccaagtacctgaaatacaaaaagcgacacttccctcaatgccaagaggta
ttgctgaattgtgaaaaggaattggaatacaaatcgctgatgaattggccaaatctggtc
ggtgttttttatttagacgattcaatagacaccttatcaaaaggtattaatgctattcag
aatggcgatatgtggttgagccgcaagctcgctcaggaatacatcgtttattatcgccag
cgtcagaccaataccacaaacgacctttattcaaagctcacacggcgtgaacagcaaatt
attcgccacttagcgaaaggtgcgaccaacacagaaattgcagataagctttttgttagt
gagaatacggtgaaaacccatctccataatctgtttaagaaaattcacgcaaagaatcga
cttcaggctcttatttgggcaaaggaaaacatcagccaggaagagctggtttaa
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